RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CCL25O15444 150 aa9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 NDUFB8O95169 186 aa9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 MRPL51Q4U2R6 128 aaKnown RBP9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 TTC9CQ8N5M4 171 aa9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 JKAMPQ9P055 326 aa9.23□□□□□ -0.93
UBE2D3-209ENST00000394804 IGKCP01834 107 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 TRGV3P03979 118 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 PF4V1P10720 104 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 ZNF502Q8TBZ5 544 aa9.22□□□□□ -0.93
UBE2D3-209ENST00000394804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 FAM120AOSQ5T036 256 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 SMPXQ9UHP9 88 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 TANC2Q9HCD6 1990 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 A0A0G2JLM5 398 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 A6NJY4 79 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 OR5A1Q8NGJ0 315 aa9.21□□□□□ -0.93
UBE2D3-209ENST00000394804 GAGE12BA1L429 117 aa9.21□□□□□ -0.94
UBE2D3-209ENST00000394804 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
UBE2D3-209ENST00000394804 MYCNOSP40205 109 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 ASIPP42127 132 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 SCGB3A1Q96QR1 104 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 COL27A1Q8IZC6 1860 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 ID1P41134 155 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 DEFB125Q8N687 156 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 NHP2Q9NX24 153 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 SCGB1C2P0DMR2 95 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 CST9LQ9H4G1 147 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 PRRC2CQ9Y520 2896 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
UBE2D3-209ENST00000394804 SRSF1Q07955 248 aaKnown RBP eCLIP9.2□□□□□ -0.942e-8■□□□□ 10.6
UBE2D3-209ENST00000394804 IGHV3OR16-10A0A075B7F0 116 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 NPYP01303 97 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 ERCC8Q13216 396 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 TMEM158Q8WZ71 300 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.19□□□□□ -0.943e-7■■■■□ 19.8
UBE2D3-209ENST00000394804 MEGF9Q9H1U4 602 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 NDUFA3O95167 84 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 BCL6BQ8N143 479 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 SCRT2Q9NQ03 307 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 CREBBPQ92793 2442 aa9.19□□□□□ -0.94
UBE2D3-209ENST00000394804 H3BVH4 76 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 PPP1R17O96001 155 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 LAGE3Q14657 143 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 OCIAD2Q56VL3 154 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 PRSS57Q6UWY2 283 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 GTSCR1Q86UQ5 136 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 Q8N976 141 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 ZC2HC1BQ5TFG8 222 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 ATMQ13315 3056 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 PKD1L2Q7Z442 2459 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 LY6EQ16553 131 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 VGLL1Q99990 258 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
UBE2D3-209ENST00000394804 H3BRM9 83 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 OR11H6Q8NGC7 330 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 FAM110DQ8TAY7 271 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 ATRXP46100 2492 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 TRAV21A0A0B4J279 112 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 EGR2P11161 476 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 PAX8Q06710 450 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 ZFYVE26Q68DK2 2539 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 PCSK5Q92824 1860 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
UBE2D3-209ENST00000394804 Q1RN00 199 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 IGLV11-55A0A075B6I3 123 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 RNF182Q8N6D2 247 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 TRBV7-1A0A0A6YYK4 115 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 C9orf118A6NHY6 69 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 K7ENP7 123 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 NPBQ8NG41 125 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
UBE2D3-209ENST00000394804 WI2-2373I1.2A0A1W2PRP0 233 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 ATP6V0E1O15342 81 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 CRYGBP07316 175 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 FAM106AQ4KMX7 169 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 IL17RELQ6ZVW7 336 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 TRAV41A0A0B4J266 112 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 NDUFS7O75251 213 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 HLA-DMBP28068 263 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 PAX2Q02962 417 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 ANKRD39Q53RE8 183 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 CLEC2AQ6UVW9 174 aa9.15□□□□□ -0.94
UBE2D3-209ENST00000394804 LINC00527Q9UJ94 153 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms