RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
ACTN1-203ENST00000394419 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
ACTN1-203ENST00000394419 EGR2P11161 476 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-203ENST00000394419 C12orf54Q6X4T0 127 aa8.26□□□□□ -1.09
ACTN1-203ENST00000394419 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-203ENST00000394419 KLK15Q9H2R5 256 aa8.26□□□□□ -1.09
ACTN1-203ENST00000394419 S100A4P26447 101 aaKnown RBP8.25□□□□□ -1.09
ACTN1-203ENST00000394419 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
ACTN1-203ENST00000394419 FCER1GP30273 86 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 SIGLEC8Q9NYZ4 499 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 FAM231BA6NCW3 169 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 SPRY2O43597 315 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 TMEM78Q5T7P6 136 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 SPANXN1Q5VSR9 72 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 PRR25Q96S07 402 aa8.25□□□□□ -1.09
ACTN1-203ENST00000394419 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 PRSS57Q6UWY2 283 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 BRD3OSQ6XYD6 125 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
ACTN1-203ENST00000394419 LYPD1Q8N2G4 141 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 C16orf92Q96LL3 132 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 C7orf71A4D174 169 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 SAA4P35542 130 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
ACTN1-203ENST00000394419 BPESC1Q9GZL8 116 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 Q6AWC8 147 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 OR11H6Q8NGC7 330 aa8.24□□□□□ -1.09
ACTN1-203ENST00000394419 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 CIDEAO60543 219 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 NPYP01303 97 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 CTSGP08311 255 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 GATA1P15976 413 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-203ENST00000394419 NBL1P41271 181 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 ZNF80P51504 273 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-203ENST00000394419 ADORA2A-AS1P86434 159 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 UBE2V1Q13404 147 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 FAM104BQ5XKR9 115 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 CFHR4Q92496 578 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 ZNF747Q9BV97 191 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 LINC01548A6NM66 108 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 M0R1W7 72 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 METTL26Q96S19 204 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 HBDP02042 147 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 LEPP41159 167 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 CDKN1BP46527 198 aa8.23□□□□□ -1.09
ACTN1-203ENST00000394419 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 M0R381 172 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 WFDC12Q8WWY7 111 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 SRSF8Q9BRL6 282 aaKnown RBP8.22□□□□□ -1.09
ACTN1-203ENST00000394419 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 PDE6HQ13956 83 aa8.22□□□□□ -1.09
ACTN1-203ENST00000394419 SONP18583 2426 aaKnown RBP8.21□□□□□ -1.09
ACTN1-203ENST00000394419 C2CD3Q4AC94 2353 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 A0A1B0GW15 77 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 TRGV3P03979 118 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 SRD5A1P18405 259 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 GCSHP23434 173 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 RIPPLY3P57055 190 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 TMEM160Q9NX00 188 aa8.21□□□□□ -1.09
ACTN1-203ENST00000394419 TRAV26-2A0A0B4J265 109 aa8.21□□□□□ -1.1
ACTN1-203ENST00000394419 BVES-AS1Q5T3Y7 98 aa8.21□□□□□ -1.1
ACTN1-203ENST00000394419 NPBQ8NG41 125 aa8.21□□□□□ -1.1
ACTN1-203ENST00000394419 LRRK2Q5S007 2527 aa8.21□□□□□ -1.1
ACTN1-203ENST00000394419 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.1
ACTN1-203ENST00000394419 PF4V1P10720 104 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-203ENST00000394419 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
ACTN1-203ENST00000394419 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 FOXC2Q99958 501 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 CCDC168Q8NDH2 2452 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 FBLL1A6NHQ2 334 aaKnown RBP8.2□□□□□ -1.1
ACTN1-203ENST00000394419 NDUFA3O95167 84 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 MGPP08493 103 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 DEFB1P60022 68 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 ATP5G2Q06055 141 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 TTC9CQ8N5M4 171 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 EEF1AKMT3Q96AZ1 226 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 DKK2Q9UBU2 259 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 A1L4Q6 167 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-203ENST00000394419 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 Q8N9W7 124 aa8.2□□□□□ -1.1
ACTN1-203ENST00000394419 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms