RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.57
HMGN1-203ENST00000380748 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-203ENST00000380748 A0A087WXM4 84 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 M0R3E3 92 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 LECT2O14960 151 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 RGS5O15539 181 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 ATP6V1G2O95670 118 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 HOXB5P09067 269 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 VAMP1P23763 118 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 PXDC1Q5TGL8 231 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 ARPC5LQ9BPX5 153 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 NAA50Q9GZZ1 169 aaKnown RBP11.45□□□□□ -0.58
HMGN1-203ENST00000380748 NPVFQ9HCQ7 196 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 PSENENQ9NZ42 101 aa11.45□□□□□ -0.58
HMGN1-203ENST00000380748 IGHV1OR15-1A0A075B7D0 117 aa11.44□□□□□ -0.58
HMGN1-203ENST00000380748 GOSR2O14653 212 aa11.44□□□□□ -0.58
HMGN1-203ENST00000380748 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGN1-203ENST00000380748 ZNF546Q86UE3 836 aa11.44□□□□□ -0.58
HMGN1-203ENST00000380748 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
HMGN1-203ENST00000380748 CCDC59Q9P031 241 aaKnown RBP11.44□□□□□ -0.58
HMGN1-203ENST00000380748 C9JCJ5 164 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 CTDSP2O14595 271 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 CTDSPLO15194 276 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 GPX1P07203 203 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 CRISP2P16562 243 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 IL18Q14116 193 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 TMEM128Q5BJH2 165 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
HMGN1-203ENST00000380748 AGPAT2O15120 278 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 PPT1P50897 306 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 CTF1Q16619 201 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 GUK1Q16774 197 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 C10orf113Q5VZT2 155 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
HMGN1-203ENST00000380748 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 MGAT4CQ9UBM8 478 aa11.42□□□□□ -0.58
HMGN1-203ENST00000380748 FNDC10F2Z333 226 aa11.41□□□□□ -0.58
HMGN1-203ENST00000380748 SSSCA1O60232 199 aa11.41□□□□□ -0.58
HMGN1-203ENST00000380748 ID3Q02535 119 aa11.41□□□□□ -0.58
HMGN1-203ENST00000380748 CIRBP-AS1Q8TBR5 109 aa11.41□□□□□ -0.58
HMGN1-203ENST00000380748 RS1O15537 224 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 HNRNPA3P51991 378 aaKnown RBP11.4□□□□□ -0.58
HMGN1-203ENST00000380748 TIRAPP58753 221 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 PPP1R1AQ13522 171 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 TMEM14EPQ6UXP3 125 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 NHLRC2Q8NBF2 726 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 MGST2Q99735 147 aa11.4□□□□□ -0.58
HMGN1-203ENST00000380748 TNXBP22105 4242 aa11.4□□□□□ -0.59
HMGN1-203ENST00000380748 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-203ENST00000380748 ZNF253O75346 499 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 SFT2D2O95562 160 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-203ENST00000380748 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 ZNF846Q147U1 533 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 RAB2BQ8WUD1 216 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
HMGN1-203ENST00000380748 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 NDUFB4O95168 129 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 NMBP08949 121 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 TNFSF8P32971 234 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 ARL16Q0P5N6 197 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 OR10J3Q5JRS4 329 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 RASL10AQ92737 203 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 DIRAS2Q96HU8 199 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
HMGN1-203ENST00000380748 LAGE3Q14657 143 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 EXOC3-AS1Q8N2X6 119 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 SOSTQ9BQB4 213 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 SRRQ9GZT4 340 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
HMGN1-203ENST00000380748 TRAV4A0A0B4J268 109 aa11.36□□□□□ -0.59
HMGN1-203ENST00000380748 IGLV2-8P01709 118 aa11.36□□□□□ -0.59
HMGN1-203ENST00000380748 Q8N3U1 123 aa11.36□□□□□ -0.59
HMGN1-203ENST00000380748 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
HMGN1-203ENST00000380748 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 RBFOX3A6NFN3 312 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 RPL37AP61513 92 aaKnown RBP11.35□□□□□ -0.59
HMGN1-203ENST00000380748 ASAH1Q13510 395 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 TDRG1Q3Y452 100 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 TMEM78Q5T7P6 136 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 BAALCQ8WXS3 180 aa11.35□□□□□ -0.59
HMGN1-203ENST00000380748 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms