RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
SMN2-201ENST00000380741 KLLNB2CW77 178 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 PYYP10082 97 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 HBG1P69891 147 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 HBG2P69892 147 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 CD300CQ08708 224 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 BTN1A1Q13410 526 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 ZNF680Q8NEM1 530 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 CHAC2Q8WUX2 184 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 FAM19A4Q96LR4 140 aa11.65□□□□□ -0.54
SMN2-201ENST00000380741 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
SMN2-201ENST00000380741 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
SMN2-201ENST00000380741 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
SMN2-201ENST00000380741 PDE6HQ13956 83 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 GCSAMLQ5JQS6 135 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 EXOC3-AS1Q8N2X6 119 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 BLNKQ8WV28 456 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 VSIG2Q96IQ7 327 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 AGPAT4-IT1Q9H0P7 198 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 TIMM9Q9Y5J7 89 aa11.64□□□□□ -0.55
SMN2-201ENST00000380741 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 ATP6V1FQ16864 119 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 EIF4E3Q8N5X7 224 aaKnown RBP11.63□□□□□ -0.55
SMN2-201ENST00000380741 LINC00477Q96M19 166 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 C18orf15Q96N68 181 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 LINC00467Q9BRT7 94 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
SMN2-201ENST00000380741 PRELID1Q9Y255 219 aa11.63□□□□□ -0.55
SMN2-201ENST00000380741 A0A096LPF7 62 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 TRGV1A0A0A0MS02 117 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
SMN2-201ENST00000380741 ANXA2RQ3ZCQ2 193 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 CCDC32Q9BV29 185 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
SMN2-201ENST00000380741 IGKV2-40A0A087WW87 121 aaPredicted RBP11.61□□□□□ -0.55
SMN2-201ENST00000380741 FAM240BA0A1B0GVZ2 78 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 MPDU1O75352 247 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 IGKV2D-40P01614 121 aaPredicted RBP11.61□□□□□ -0.55
SMN2-201ENST00000380741 GPX1P07203 203 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 CRISP2P16562 243 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 ICAM4Q14773 271 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 PRR9Q5T870 116 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 C9orf47Q6ZRZ4 202 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 AAMDCQ9H7C9 122 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
SMN2-201ENST00000380741 SPINK4O60575 86 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 TCL1AP56279 114 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 FAM122CQ6P4D5 195 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 THAP6Q8TBB0 222 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 VGLL1Q99990 258 aa11.6□□□□□ -0.55
SMN2-201ENST00000380741 NMBP08949 121 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
SMN2-201ENST00000380741 NHLH2Q02577 135 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 Q6ZQT7 251 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 MIR17HGQ75NE6 70 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 OR5C1Q8NGR4 320 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 TP53TG3Q9ULZ0 132 aa11.59□□□□□ -0.55
SMN2-201ENST00000380741 LINC00315P59091 139 aa11.58□□□□□ -0.56
SMN2-201ENST00000380741 IBA57Q5T440 356 aaKnown RBP11.58□□□□□ -0.56
SMN2-201ENST00000380741 ST6GAL2Q96JF0 529 aa11.58□□□□□ -0.56
SMN2-201ENST00000380741 NDUFA13Q9P0J0 144 aa11.58□□□□□ -0.56
SMN2-201ENST00000380741 ZNF492Q9P255 531 aa11.58□□□□□ -0.56
SMN2-201ENST00000380741 IGHV1OR15-1A0A075B7D0 117 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 RGS13O14921 159 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 NBEAP1P0C6P0 100 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 MZT2BQ6NZ67 158 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 FXYD5Q96DB9 178 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 OR51M1Q9H341 326 aa11.57□□□□□ -0.56
SMN2-201ENST00000380741 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
SMN2-201ENST00000380741 SIVA1O15304 175 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 PAX4O43316 350 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 SIX6O95475 246 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 OR10J4P0C629 311 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 Q8N1X5 172 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 Q8TAT8 98 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 ARPC5LQ9BPX5 153 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 OR5AC2Q9NZP5 309 aa11.56□□□□□ -0.56
SMN2-201ENST00000380741 E5RGE8 158 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 ZNF138P52744 262 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 ASAH1Q13510 395 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 LRRC37A5PQ49AS3 106 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 Q6ZRN7 208 aaPredicted RBP11.55□□□□□ -0.56
SMN2-201ENST00000380741 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
SMN2-201ENST00000380741 SLC25A31Q9H0C2 315 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 ICOSQ9Y6W8 199 aa11.55□□□□□ -0.56
SMN2-201ENST00000380741 H0YIZ8 118 aa11.54□□□□□ -0.56
SMN2-201ENST00000380741 NXPH4O95158 308 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms