RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 RPL11P62913 178 aaKnown RBP8.72□□□□□ -1.01
USP6NL-202ENST00000379237 MLST8Q9BVC4 326 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 CREBBPQ92793 2442 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-202ENST00000379237 FOXC1Q12948 553 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 IMMP1LQ96LU5 166 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 EDA2RQ9HAV5 297 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 C2orf16Q68DN1 1984 aa8.71□□□□□ -1.01
USP6NL-202ENST00000379237 SHISA9B4DS77 424 aa8.71□□□□□ -1.01
USP6NL-202ENST00000379237 F5H697 171 aa8.71□□□□□ -1.01
USP6NL-202ENST00000379237 DLX6P56179 175 aa8.71□□□□□ -1.01
USP6NL-202ENST00000379237 TMEM126AQ9H061 195 aa8.71□□□□□ -1.01
USP6NL-202ENST00000379237 H3BMM0 161 aa8.71□□□□□ -1.02
USP6NL-202ENST00000379237 TNFAIP6P98066 277 aaPredicted RBP8.71□□□□□ -1.02
USP6NL-202ENST00000379237 IL11RAQ14626 422 aa8.71□□□□□ -1.02
USP6NL-202ENST00000379237 PMVKQ15126 192 aa8.71□□□□□ -1.02
USP6NL-202ENST00000379237 UBE2WQ96B02 151 aa8.71□□□□□ -1.02
USP6NL-202ENST00000379237 RNF7Q9UBF6 113 aa8.71□□□□□ -1.02
USP6NL-202ENST00000379237 PRR14LQ5THK1 2151 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TCF15Q12870 199 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 EIF4EBP1Q13541 118 aaPredicted RBP8.7□□□□□ -1.02
USP6NL-202ENST00000379237 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TIMD4Q96H15 378 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TMEM101Q96IK0 257 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TRGV5A0A0B4J1U4 118 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TCL1BO95988 128 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 ATXN8Q156A1 80 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 ZCCHC24Q8N2G6 241 aaKnown RBP8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TTTY12Q9BZ98 90 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 A0A1W2PR77 199 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 PINLYPA6NC86 204 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 F8VRH5 84 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 WT1-ASQ06250 92 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 FAM216BQ8N7L0 139 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 TRGV9Q99603 122 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 RAB1BQ9H0U4 201 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 RHODO00212 210 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 MEOX1P50221 254 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 PRO1854Q9UHT4 67 aa8.7□□□□□ -1.02
USP6NL-202ENST00000379237 IGKV3D-15A0A087WSY6 115 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 A0A087WX48 190 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 RNF138Q8WVD3 245 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 NDUFA4L2Q9NRX3 87 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 NOTCH3Q9UM47 2321 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 IGHV3-35A0A0C4DH35 117 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 MSRB1Q9NZV6 116 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 IGKV1D-17A0A075B6S4 117 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 M0R381 172 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
USP6NL-202ENST00000379237 C17orf77Q96MU5 243 aa8.69□□□□□ -1.02
USP6NL-202ENST00000379237 EPOPA6NHQ4 379 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 Q8N8P6 123 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 FAM57AQ8TBR7 257 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 IGHV3OR16-8A0A075B7F1 116 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 TMEM75Q8N9X5 138 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 PKDREJQ9NTG1 2253 aa8.68□□□□□ -1.02
USP6NL-202ENST00000379237 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 KLHL30-AS1Q8NEE0 82 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 A0A096LNJ9 63 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 NDUFB3O43676 98 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 C17orf82Q86X59 251 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-202ENST00000379237 PHLDA1Q8WV24 401 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-202ENST00000379237 C7orf69Q9H7B7 122 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 CCL3L1P16619 93 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
USP6NL-202ENST00000379237 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
USP6NL-202ENST00000379237 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
USP6NL-202ENST00000379237 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 GAGE2AQ6NT46 116 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 SPXQ9BT56 116 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 TRAV17A0A0B4J275 112 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 GP9P14770 177 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 COX7A1P24310 79 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 SRRM5B3KS81 715 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 ADIPOQQ15848 244 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 VPREB3Q9UKI3 123 aa8.66□□□□□ -1.02
USP6NL-202ENST00000379237 HLA-DMBP28068 263 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 DTX2Q86UW9 622 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 CCL17Q92583 94 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 PCNX1Q96RV3 2341 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.02
USP6NL-202ENST00000379237 CECR9P0C854 216 aa8.65□□□□□ -1.02
USP6NL-202ENST00000379237 J3KT08 172 aa8.65□□□□□ -1.03
USP6NL-202ENST00000379237 CCL8P80075 99 aa8.65□□□□□ -1.03
USP6NL-202ENST00000379237 SPRY4Q9C004 299 aa8.65□□□□□ -1.03
USP6NL-202ENST00000379237 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms