RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TRAV34A0A0B4J273 112 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 CA1P00915 261 aaPredicted RBP9.58□□□□□ -0.88
VRK3-202ENST00000377011 TCRAP04437 139 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 HBBP68871 147 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 NSUN5P1Q3KNT7 163 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
VRK3-202ENST00000377011 A0A1W2PRX2 142 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 NPIPB6E9PJ23 425 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 IGLC1P0CG04 106 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 GNG5P63218 68 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 S100A7AQ86SG5 101 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 ALKBH7Q9BT30 221 aaPredicted RBP9.57□□□□□ -0.88
VRK3-202ENST00000377011 Q9H3A6 140 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 MRPS16Q9Y3D3 137 aaKnown RBP9.57□□□□□ -0.88
VRK3-202ENST00000377011 TNCP24821 2201 aa9.57□□□□□ -0.88
VRK3-202ENST00000377011 NCBP2LA6PVI3 153 aaKnown RBP9.56□□□□□ -0.88
VRK3-202ENST00000377011 I3L2K1 104 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 HSBP1O75506 76 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 P01737 135 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 LYPD1Q8N2G4 141 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 SRSF12Q8WXF0 261 aaKnown RBP9.56□□□□□ -0.88
VRK3-202ENST00000377011 TXN2Q99757 166 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 TGP01266 2768 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 IGHV3-48P01763 117 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 HNRNPA3P51991 378 aaKnown RBP9.56□□□□□ -0.88
VRK3-202ENST00000377011 GDF5OSQ5U4N7 250 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 RBPMS2Q6ZRY4 209 aaKnown RBP9.56□□□□□ -0.88
VRK3-202ENST00000377011 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
VRK3-202ENST00000377011 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
VRK3-202ENST00000377011 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
VRK3-202ENST00000377011 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
VRK3-202ENST00000377011 Q6ZN92 141 aa9.55□□□□□ -0.88
VRK3-202ENST00000377011 Q86TA4 180 aa9.55□□□□□ -0.88
VRK3-202ENST00000377011 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
VRK3-202ENST00000377011 SLC25A39Q9BZJ4 359 aaPredicted RBP9.55□□□□□ -0.88
VRK3-202ENST00000377011 LAMTOR2Q9Y2Q5 125 aa9.55□□□□□ -0.88
VRK3-202ENST00000377011 M0R2Z0 102 aa9.54□□□□□ -0.88
VRK3-202ENST00000377011 IGHG2P01859 326 aa9.54□□□□□ -0.88
VRK3-202ENST00000377011 PSG1P11464 419 aa9.54□□□□□ -0.88
VRK3-202ENST00000377011 FOXA3P55318 350 aaPredicted RBP9.54□□□□□ -0.88
VRK3-202ENST00000377011 NDPQ00604 133 aa9.54□□□□□ -0.88
VRK3-202ENST00000377011 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
VRK3-202ENST00000377011 TRAV30A0A087WSZ9 112 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 A0A1B0GW15 77 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 M0QZ24 198 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 NTF3P20783 257 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 LYZP61626 148 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 TMEM75Q8N9X5 138 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 GATD1Q8NB37 220 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 NPBQ8NG41 125 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 H3BRN7 92 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 K7EQM0 130 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 NDUFA3O95167 84 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
VRK3-202ENST00000377011 BATFQ16520 125 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 BPIFA4PQ86YQ2 179 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 OR4F17Q8NGA8 305 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
VRK3-202ENST00000377011 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 G3V318 75 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 NBR2O15453 112 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 CRXO43186 299 aaPredicted RBP9.52□□□□□ -0.89
VRK3-202ENST00000377011 IGKV1-17P01599 117 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 TSPOP30536 169 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 PLGLAQ15195 96 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 Q6AWC8 147 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 GTSF1Q8WW33 167 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
VRK3-202ENST00000377011 TRBV19A0A075B6N1 114 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 G3V4G9 280 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 K7EIM0 57 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 NPSP0C0P6 89 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 CAMPP49913 170 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 CFHR3Q02985 330 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 PDE6HQ13956 83 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 TMEM70Q9BUB7 260 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 RPH3ALQ9UNE2 315 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 ATP6V0E1O15342 81 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
VRK3-202ENST00000377011 C5orf64Q2M2E5 130 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 EBLN2Q6P2I7 272 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
VRK3-202ENST00000377011 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
VRK3-202ENST00000377011 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms