RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 LINC00467Q9BRT7 94 aa11.99□□□□□ -0.49
HLA-A-201ENST00000376802 SCRT2Q9NQ03 307 aa11.99□□□□□ -0.49
HLA-A-201ENST00000376802 C7orf71A4D174 169 aa11.98□□□□□ -0.49
HLA-A-201ENST00000376802 IFITM3Q01628 133 aa11.98□□□□□ -0.49
HLA-A-201ENST00000376802 IL15RAQ13261 267 aa11.98□□□□□ -0.49
HLA-A-201ENST00000376802 Q6ZRN7 208 aaPredicted RBP11.98□□□□□ -0.49
HLA-A-201ENST00000376802 AGPAT4-IT1Q9H0P7 198 aa11.98□□□□□ -0.49
HLA-A-201ENST00000376802 TMEM14CQ9P0S9 112 aa11.98□□□□□ -0.49
HLA-A-201ENST00000376802 TRGV2A0A075B6R0 118 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 IGSF23A1L1A6 192 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 TCRBP04435 133 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 DEFA1P59665 94 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 DEFA3P59666 94 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 BTN1A1Q13410 526 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 ANXA2RQ3ZCQ2 193 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 ZNF680Q8NEM1 530 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 LINC00477Q96M19 166 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 SEC22CQ9BRL7 303 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
HLA-A-201ENST00000376802 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 KLF12Q9Y4X4 402 aa11.97□□□□□ -0.49
HLA-A-201ENST00000376802 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 LYRM1O43325 122 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 PYYP10082 97 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
HLA-A-201ENST00000376802 S100A11P31949 105 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 SULT1A1P50225 295 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 LINC00315P59091 139 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 Q6ZQT7 251 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 EXOC3-AS1Q8N2X6 119 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 C2orf50Q96LR7 162 aa11.96□□□□□ -0.49
HLA-A-201ENST00000376802 TRAV6A0A075B6T7 132 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 TRGV1A0A0A0MS02 117 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 SPINK4O60575 86 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 CRISP2P16562 243 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
HLA-A-201ENST00000376802 BAXQ07812 192 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 ASAH1Q13510 395 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 RGS21Q2M5E4 152 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 C12orf45Q8N5I9 185 aaPredicted RBP11.95□□□□□ -0.5
HLA-A-201ENST00000376802 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
HLA-A-201ENST00000376802 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 PRELID1Q9Y255 219 aa11.95□□□□□ -0.5
HLA-A-201ENST00000376802 TCL1AP56279 114 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 RAB32Q13637 225 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 PDE6HQ13956 83 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 GCSAMLQ5JQS6 135 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 PRR9Q5T870 116 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 ZFAND2AQ8N6M9 145 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 NUDT15Q9NV35 164 aa11.94□□□□□ -0.5
HLA-A-201ENST00000376802 PTTG1O95997 202 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
HLA-A-201ENST00000376802 FGF7P21781 194 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 FAM167A-AS1Q96KT0 104 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 VGLL1Q99990 258 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 TIMM9Q9Y5J7 89 aa11.93□□□□□ -0.5
HLA-A-201ENST00000376802 IGKV2-40A0A087WW87 121 aaPredicted RBP11.92□□□□□ -0.5
HLA-A-201ENST00000376802 SIVA1O15304 175 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 MPDU1O75352 247 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 IGKV2D-40P01614 121 aaPredicted RBP11.92□□□□□ -0.5
HLA-A-201ENST00000376802 GPX1P07203 203 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 NMBP08949 121 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 S100A10P60903 97 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 HBG1P69891 147 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 HBG2P69892 147 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 ICAM4Q14773 271 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
HLA-A-201ENST00000376802 ST6GAL2Q96JF0 529 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 SLC25A2Q9BXI2 301 aa11.92□□□□□ -0.5
HLA-A-201ENST00000376802 PAX4O43316 350 aa11.91□□□□□ -0.5
HLA-A-201ENST00000376802 ATP6V1FQ16864 119 aa11.91□□□□□ -0.5
HLA-A-201ENST00000376802 STX12Q86Y82 276 aa11.91□□□□□ -0.5
HLA-A-201ENST00000376802 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
HLA-A-201ENST00000376802 TNFRSF18Q9Y5U5 241 aa11.91□□□□□ -0.5
HLA-A-201ENST00000376802 NXPH4O95158 308 aa11.9□□□□□ -0.5
HLA-A-201ENST00000376802 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
HLA-A-201ENST00000376802 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
HLA-A-201ENST00000376802 MZT2BQ6NZ67 158 aa11.9□□□□□ -0.5
HLA-A-201ENST00000376802 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
HLA-A-201ENST00000376802 MRPL16Q9NX20 251 aaKnown RBP11.9□□□□□ -0.5
HLA-A-201ENST00000376802 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
HLA-A-201ENST00000376802 IGHV1OR15-1A0A075B7D0 117 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 H2AFB2P0C5Z0 115 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 NHLH2Q02577 135 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 FHL2Q14192 279 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 AAMDCQ9H7C9 122 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 GPN1Q9HCN4 374 aaPredicted RBP11.89□□□□□ -0.51
HLA-A-201ENST00000376802 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
HLA-A-201ENST00000376802 RGS13O14921 159 aa11.88□□□□□ -0.51
HLA-A-201ENST00000376802 CRYBA4P53673 196 aa11.88□□□□□ -0.51
HLA-A-201ENST00000376802 TMEM78Q5T7P6 136 aa11.88□□□□□ -0.51
HLA-A-201ENST00000376802 LYPD5Q6UWN5 251 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms