RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TSSC4Q9Y5U2 329 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-201ENST00000376656 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 BMI1P35226 326 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 PSMG3-AS1Q96PY0 264 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 SRSF8Q9BRL6 282 aaKnown RBP12.85□□□□□ -0.35
TRIM39-201ENST00000376656 TM2D2Q9BX73 214 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 LYNX1G3V0Z9 82 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 LYNX1P0DP58 116 aa12.85□□□□□ -0.35
TRIM39-201ENST00000376656 IGHG4P01861 327 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 MAPKAPK5-AS1Q8N8E1 139 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 SIGMAR1Q99720 223 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 A0A0G2JNJ9 132 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 E9PLD3 99 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-201ENST00000376656 DPM2O94777 84 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 NXT2Q9NPJ8 142 aaKnown RBP12.84□□□□□ -0.35
TRIM39-201ENST00000376656 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-201ENST00000376656 Q9UFV3 132 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 DMXL1Q9Y485 3027 aa12.84□□□□□ -0.35
TRIM39-201ENST00000376656 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.35
TRIM39-201ENST00000376656 IGLL5B9A064 214 aa12.83□□□□□ -0.35
TRIM39-201ENST00000376656 FTH1P19P0C7X4 201 aa12.83□□□□□ -0.35
TRIM39-201ENST00000376656 AGRNO00468 2067 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 FANCD2OSQ96PS1 177 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 SMAD5-AS1Q9Y6J3 95 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 PSMG4Q5JS54 123 aa12.83□□□□□ -0.36
TRIM39-201ENST00000376656 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
TRIM39-201ENST00000376656 VSTM5A8MXK1 200 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 MFAP4P55083 255 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 ERCC8Q13216 396 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 SH2D6Q7Z4S9 175 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 RNF5Q99942 180 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 IGHV3OR16-8A0A075B7F1 116 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 GAGE12HA6NDE8 117 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 H3BMG7 143 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 Q6ZS92 163 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
TRIM39-201ENST00000376656 NBR2O15453 112 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
TRIM39-201ENST00000376656 CD300EQ496F6 205 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-201ENST00000376656 DEFB124Q8NES8 71 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 ZNF479Q96JC4 524 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 E7EQL1 145 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 ATP5LO75964 103 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 DTX2Q86UW9 622 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 MTURNQ8N3F0 131 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 ARPC1AQ92747 370 aa12.81□□□□□ -0.36
TRIM39-201ENST00000376656 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 IGLV2-18A0A075B6J9 118 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 F8W1H4 67 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 Q8N8P6 123 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 C12orf74Q32Q52 190 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 IGFL3Q6UXB1 125 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 DYNAPQ8N1N2 210 aa12.8□□□□□ -0.36
TRIM39-201ENST00000376656 PRAC2D3DTV9 90 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-201ENST00000376656 CNOT1A5YKK6 2376 aaKnown RBP12.79□□□□□ -0.36
TRIM39-201ENST00000376656 TRGV3P03979 118 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIM39-201ENST00000376656 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-201ENST00000376656 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 POLEQ07864 2286 aa12.79□□□□□ -0.36
TRIM39-201ENST00000376656 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
TRIM39-201ENST00000376656 C21orf62Q9NYP8 219 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 CFHR4Q92496 578 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-201ENST00000376656 PRRG2O14669 202 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 BDP1A6H8Y1 2624 aa12.78□□□□□ -0.36
TRIM39-201ENST00000376656 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.36
TRIM39-201ENST00000376656 NDPQ00604 133 aa12.77□□□□□ -0.37
TRIM39-201ENST00000376656 HES1Q14469 280 aa12.77□□□□□ -0.37
TRIM39-201ENST00000376656 LINC01559Q495D7 138 aa12.77□□□□□ -0.37
TRIM39-201ENST00000376656 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
TRIM39-201ENST00000376656 ZNF48Q96MX3 618 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-201ENST00000376656 HIST1H4GQ99525 98 aa12.77□□□□□ -0.37
TRIM39-201ENST00000376656 NDUFA3O95167 84 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 INSL3P51460 131 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 CCDC144NLQ6NUI1 221 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 RNF182Q8N6D2 247 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 MYOZ3Q8TDC0 251 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 C11orf21Q9P2W6 132 aa12.76□□□□□ -0.37
TRIM39-201ENST00000376656 EP300Q09472 2414 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-201ENST00000376656 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms