RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CLEC19AQ6UXS0 136 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 AJUBAQ96IF1 538 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
UBR4-203ENST00000375225 ARHGAP32A7KAX9 2087 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 OR4C46A6NHA9 309 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 PPBPP02775 128 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 TMEM78Q5T7P6 136 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 URB1-AS1Q96HZ7 61 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 MEGF9Q9H1U4 602 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 MS4A6AQ9H2W1 248 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 U3KQK5 164 aa9.47□□□□□ -0.89
UBR4-203ENST00000375225 BRI3O95415 125 aa9.46□□□□□ -0.89
UBR4-203ENST00000375225 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.89
UBR4-203ENST00000375225 USMG5Q96IX5 58 aa9.46□□□□□ -0.89
UBR4-203ENST00000375225 PRELID3AQ96N28 172 aa9.46□□□□□ -0.89
UBR4-203ENST00000375225 B4DSR2 109 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 ORM1P02763 201 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 MSMBP08118 114 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 TWIST1Q15672 202 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 BATFQ16520 125 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 BCL6BQ8N143 479 aaPredicted RBP9.46□□□□□ -0.9
UBR4-203ENST00000375225 CCDC140Q96MF4 163 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 DOPEY2Q9Y3R5 2298 aa9.46□□□□□ -0.9
UBR4-203ENST00000375225 ANKRD17O75179 2603 aaKnown RBP9.45□□□□□ -0.9
UBR4-203ENST00000375225 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 CSN3P07498 182 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 TSPOP30536 169 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 CKS2P33552 79 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 ZNF138P52744 262 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 Q5PR19 223 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 C9orf139Q6ZV77 190 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 SPATA12Q7Z6I5 190 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 VGLL1Q99990 258 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
UBR4-203ENST00000375225 D6R8Y8 96 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 G3V318 75 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 TRGV3P03979 118 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 IGLC6P0CF74 106 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 GATA3P23771 443 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 ARL3P36405 182 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 GAGE1Q13065 139 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 PSMG4Q5JS54 123 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 LINC01356Q8N9X3 169 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
UBR4-203ENST00000375225 TRAV40A0A0B4J280 105 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 A0A0G2JLM5 398 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 M0QZ24 198 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 NDUFA4O00483 81 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 IGF1P05019 195 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 LOXL1Q08397 574 aaPredicted RBP9.43□□□□□ -0.9
UBR4-203ENST00000375225 C16orf92Q96LL3 132 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 U3KQE9 123 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 SPG11Q96JI7 2443 aa9.43□□□□□ -0.9
UBR4-203ENST00000375225 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 HBDP02042 147 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 IGLL1P15814 213 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 CACNG7P62955 275 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
UBR4-203ENST00000375225 C19orf54Q5BKX5 351 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 SLC25A34Q6PIV7 304 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 Q8TAT8 98 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 NPFFR1Q9GZQ6 430 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 ABCA2Q9BZC7 2435 aa9.42□□□□□ -0.9
UBR4-203ENST00000375225 TMEM213A2RRL7 107 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 OVOL1O14753 267 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 IGHG4P01861 327 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
UBR4-203ENST00000375225 HIST2H2BCQ6DN03 193 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 C8orf86Q6ZUL3 223 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 AMN1Q8IY45 258 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 DPF1Q92782 380 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
UBR4-203ENST00000375225 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 ABCA1O95477 2261 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 A0A096LNT2 108 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 TCF21O43680 179 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 IGHG2P01859 326 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 TMEM219Q86XT9 240 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 Q96MF0 132 aa9.41□□□□□ -0.9
UBR4-203ENST00000375225 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms