RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 LOXP28300 417 aaPredicted RBP7.55□□□□□ -1.2
LRRC40-201ENST00000370952 PIFOQ8TCI5 191 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 HIST1H4GQ99525 98 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 CUL9Q8IWT3 2517 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 CNIH1O95406 144 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 IGHV1-8P0DP01 117 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 LYPD1Q8N2G4 141 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 PRR25Q96S07 402 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 GVINP1Q7Z2Y8 2422 aa7.55□□□□□ -1.2
LRRC40-201ENST00000370952 CD40P25942 277 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 CRYBA4P53673 196 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 SCGB2A2Q13296 93 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 NDUFA3O95167 84 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 IGLC6P0CF74 106 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 DLX6P56179 175 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 PRO0461Q9UI25 63 aa7.54□□□□□ -1.2
LRRC40-201ENST00000370952 IGHV3OR16-8A0A075B7F1 116 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 IGHV1-3A0A0C4DH29 117 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 C17orf100A8MU93 164 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 COX7A1P24310 79 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 TTC9CQ8N5M4 171 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 TMEM178BH3BS89 294 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 IGHV3-23P01764 117 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 GEMIN7Q9H840 131 aaKnown RBP7.53□□□□□ -1.2
LRRC40-201ENST00000370952 CACNA1HO95180 2353 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 ATMQ13315 3056 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 TRAV17A0A0B4J275 112 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
LRRC40-201ENST00000370952 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
LRRC40-201ENST00000370952 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
LRRC40-201ENST00000370952 CEACAM4O75871 244 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 APOMO95445 188 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 EFNA4P52798 201 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 TMEM155Q4W5P6 130 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
LRRC40-201ENST00000370952 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
LRRC40-201ENST00000370952 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 CD59P13987 128 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 ZNF502Q8TBZ5 544 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 NXT2Q9NPJ8 142 aaKnown RBP7.52□□□□□ -1.21
LRRC40-201ENST00000370952 FAM215AQ9Y5M1 114 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 ATP5LO75964 103 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 TRGV3P03979 118 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 ADIPOQQ15848 244 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 C8orf31Q8N9H6 132 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 CYSLTR1Q9Y271 337 aa7.52□□□□□ -1.21
LRRC40-201ENST00000370952 IGHV3-35A0A0C4DH35 117 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 VSTM5A8MXK1 200 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 ERCC8Q13216 396 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 GFRALQ6UXV0 394 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 GLMPQ8WWB7 406 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 APC2O95996 2303 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 EP300Q09472 2414 aaPredicted RBP7.51□□□□□ -1.21
LRRC40-201ENST00000370952 SRSF1Q07955 248 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRRC40-201ENST00000370952 TCTEX1D4Q5JR98 221 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 KLK15Q9H2R5 256 aa7.51□□□□□ -1.21
LRRC40-201ENST00000370952 TRBV7-3A0A075B6L6 115 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 THBDP07204 575 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 FOXI1Q12951 378 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 Q8N8P6 123 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 PTH2Q96A98 100 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 MED13LQ71F56 2210 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 LRBAP50851 2863 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 MT-ATP8P03928 68 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 SPINK8P0C7L1 97 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
LRRC40-201ENST00000370952 PDE6HQ13956 83 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
LRRC40-201ENST00000370952 C8orf86Q6ZUL3 223 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 RPEQ96AT9 228 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 SH3BGRL2Q9UJC5 107 aa7.5□□□□□ -1.21
LRRC40-201ENST00000370952 IGLV2-18A0A075B6J9 118 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 NCBP2LA6PVI3 153 aaKnown RBP7.49□□□□□ -1.21
LRRC40-201ENST00000370952 PRAC2D3DTV9 90 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 BUB1B-PAK6H3BSN5 160 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 IGLV1-47P01700 117 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 FHL3Q13643 280 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 UFC1Q9Y3C8 167 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 ABCA4P78363 2273 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 LINC01548A6NM66 108 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 TNFRSF13BO14836 293 aaPredicted RBP7.49□□□□□ -1.21
LRRC40-201ENST00000370952 IGHG4P01861 327 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 ZNF883P0CG24 379 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 TAL2Q16559 108 aa7.49□□□□□ -1.21
LRRC40-201ENST00000370952 ZNF418Q8TF45 676 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms