RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 EMP1P54849 157 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 AKR1C8PQ5T2L2 129 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 KCNRGQ8N5I3 272 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 C16orf74Q96GX8 76 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 DKK2Q9UBU2 259 aa13.28□□□□□ -0.28
CHTOP-202ENST00000368687 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
CHTOP-202ENST00000368687 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 CRISP2P16562 243 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 EIF5AP63241 154 aaKnown RBP13.27□□□□□ -0.29
CHTOP-202ENST00000368687 GFI1BQ5VTD9 330 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 Q6ZTC4 211 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 CCDC28AQ8IWP9 274 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 AGPAT4-IT1Q9H0P7 198 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 CELA1Q9UNI1 258 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 LENEPQ9Y5L5 61 aa13.27□□□□□ -0.29
CHTOP-202ENST00000368687 IGKV2-40A0A087WW87 121 aaPredicted RBP13.26□□□□□ -0.29
CHTOP-202ENST00000368687 SERTM2A0A1B0GWG4 89 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 KLLNB2CW77 178 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 SMLR1H3BR10 107 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 IGKV2D-40P01614 121 aaPredicted RBP13.26□□□□□ -0.29
CHTOP-202ENST00000368687 ZNF138P52744 262 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 C12orf74Q32Q52 190 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 FAM222AQ5U5X8 452 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
CHTOP-202ENST00000368687 TMED6Q8WW62 240 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 FAM19A4Q96LR4 140 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
CHTOP-202ENST00000368687 CTXND1A0A1B0GTU2 59 aa13.25□□□□□ -0.29
CHTOP-202ENST00000368687 C7orf71A4D174 169 aa13.25□□□□□ -0.29
CHTOP-202ENST00000368687 ZNF705GA8MUZ8 300 aaPredicted RBP13.25□□□□□ -0.29
CHTOP-202ENST00000368687 GCHFRP30047 84 aa13.25□□□□□ -0.29
CHTOP-202ENST00000368687 ERCC8Q13216 396 aa13.25□□□□□ -0.29
CHTOP-202ENST00000368687 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
CHTOP-202ENST00000368687 PGPA6NDG6 321 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 DIRC3C9JPN6 131 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 HMGB3O15347 200 aaKnown RBP13.24□□□□□ -0.29
CHTOP-202ENST00000368687 GPX1P07203 203 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 PRB4P10163 310 aaPredicted RBP13.24□□□□□ -0.29
CHTOP-202ENST00000368687 ST6GAL2Q96JF0 529 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 VGLL1Q99990 258 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 CYTL1Q9NRR1 136 aa13.24□□□□□ -0.29
CHTOP-202ENST00000368687 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 K7EQM0 130 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 BCL2L11O43521 198 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 Q6ZNX1 250 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 OR11H4Q8NGC9 324 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 RNASE8Q8TDE3 154 aaKnown RBP13.23□□□□□ -0.29
CHTOP-202ENST00000368687 FAM210BQ96KR6 192 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 HYLS1Q96M11 299 aa13.23□□□□□ -0.29
CHTOP-202ENST00000368687 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
CHTOP-202ENST00000368687 TRAV12-3A0A0B4J271 114 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 UMAD1C9J7I0 102 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 PFDN1O60925 122 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 SEC11BP0C7V7 166 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 HTN1P15515 57 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 DAD1P61803 113 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 ZNF680Q8NEM1 530 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 LINC00467Q9BRT7 94 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 NKX6-2Q9C056 277 aaPredicted RBP13.22□□□□□ -0.29
CHTOP-202ENST00000368687 DNAH1Q9P2D7 4330 aa13.22□□□□□ -0.29
CHTOP-202ENST00000368687 J3KRW8 73 aa13.21□□□□□ -0.29
CHTOP-202ENST00000368687 KIR3DS1Q14943 382 aa13.21□□□□□ -0.29
CHTOP-202ENST00000368687 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
CHTOP-202ENST00000368687 ZNF471Q9BX82 626 aaPredicted RBP13.21□□□□□ -0.29
CHTOP-202ENST00000368687 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
CHTOP-202ENST00000368687 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
CHTOP-202ENST00000368687 IGLL5B9A064 214 aa13.2□□□□□ -0.3
CHTOP-202ENST00000368687 EIF3GO75821 320 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHTOP-202ENST00000368687 RNASE4P34096 147 aaKnown RBP13.2□□□□□ -0.3
CHTOP-202ENST00000368687 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
CHTOP-202ENST00000368687 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
CHTOP-202ENST00000368687 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 ZNF324O75467 553 aaPredicted RBP13.19□□□□□ -0.3
CHTOP-202ENST00000368687 AZU1P20160 251 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 DPPA3Q6W0C5 159 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 GOLT1AQ6ZVE7 132 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 ZNF767PQ75MW2 155 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
CHTOP-202ENST00000368687 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
CHTOP-202ENST00000368687 IGHV4-4A0A075B6R2 117 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 RGS13O14921 159 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 TPT1P13693 172 aaKnown RBP13.18□□□□□ -0.3
CHTOP-202ENST00000368687 CD300CQ08708 224 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 BTN1A1Q13410 526 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 LGALS9CQ6DKI2 356 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
CHTOP-202ENST00000368687 EIF4E3Q8N5X7 224 aaKnown RBP13.18□□□□□ -0.3
CHTOP-202ENST00000368687 Q8TAT8 98 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 RPH3ALQ9UNE2 315 aa13.18□□□□□ -0.3
CHTOP-202ENST00000368687 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms