RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 IGHV4-38-2P0DP08 117 aa14.78□□□□□ -0.04
CLIP2-202ENST00000361545 TDGF1P3P51864 188 aa14.77□□□□□ -0.04
CLIP2-202ENST00000361545 SLC25A2Q9BXI2 301 aa14.77□□□□□ -0.04
CLIP2-202ENST00000361545 E9PQ18 207 aa14.77□□□□□ -0.04
CLIP2-202ENST00000361545 PAX2Q02962 417 aa14.77□□□□□ -0.04
CLIP2-202ENST00000361545 TMEM158Q8WZ71 300 aa14.77□□□□□ -0.04
CLIP2-202ENST00000361545 C6orf226Q5I0X4 101 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 GAGE12BA1L429 117 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 GAGE7O76087 117 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 GAGE12FP0CL80 117 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 GAGE12GP0CL81 117 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 GAGE12IP0CL82 117 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 C1orf194Q5T5A4 169 aa14.77□□□□□ -0.05
CLIP2-202ENST00000361545 PFN1P07737 140 aaKnown RBP14.76□□□□□ -0.05
CLIP2-202ENST00000361545 RASL11AQ6T310 242 aa14.76□□□□□ -0.05
CLIP2-202ENST00000361545 PTPN13Q12923 2485 aa14.76□□□□□ -0.05
CLIP2-202ENST00000361545 WISP2O76076 250 aa14.76□□□□□ -0.05
CLIP2-202ENST00000361545 DEFB136Q30KP8 78 aa14.76□□□□□ -0.05
CLIP2-202ENST00000361545 SPRY4Q9C004 299 aa14.76□□□□□ -0.05
CLIP2-202ENST00000361545 TMEM213A2RRL7 107 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 HAPLN4Q86UW8 402 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 TMEM75Q8N9X5 138 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 JPT2Q9H910 190 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 KLF2Q9Y5W3 355 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-202ENST00000361545 PAX4O43316 350 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 TSPAN13O95857 204 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 AMBPP02760 352 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 RNF138Q8WVD3 245 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 MCRIP2Q9BUT9 160 aaKnown RBP14.75□□□□□ -0.05
CLIP2-202ENST00000361545 CST9LQ9H4G1 147 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 FNDC4Q9H6D8 234 aaPredicted RBP14.75□□□□□ -0.05
CLIP2-202ENST00000361545 MRPL27Q9P0M9 148 aaKnown RBP14.75□□□□□ -0.05
CLIP2-202ENST00000361545 FAM90A2PQ658T7 463 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 OR2K2Q8NGT1 345 aa14.75□□□□□ -0.05
CLIP2-202ENST00000361545 DLEU1O43261 78 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 AZU1P20160 251 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 SEM1Q6ZVN7 128 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 TMEM256Q8N2U0 113 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 PYY3Q5JQD4 70 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 SMPXQ9UHP9 88 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 CDKN1BP46527 198 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 MRAPQ8TCY5 172 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 DOCK11Q5JSL3 2073 aa14.74□□□□□ -0.05
CLIP2-202ENST00000361545 IGHV1OR15-1A0A075B7D0 117 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 H3BRN7 92 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 C5orf30Q96GV9 206 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 FGF23Q9GZV9 251 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-202ENST00000361545 IGHV7-4-1A0A0J9YVY3 117 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 IGLC1P0CG04 106 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 APOC4P55056 127 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 CYYR1Q96J86 154 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 C10orf126Q8N4M7 172 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 RASL10AQ92737 203 aa14.73□□□□□ -0.05
CLIP2-202ENST00000361545 WIPF3A6NGB9 483 aa14.72□□□□□ -0.05
CLIP2-202ENST00000361545 SEC11AP67812 179 aa14.72□□□□□ -0.05
CLIP2-202ENST00000361545 SS18Q15532 418 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 TRPT1Q86TN4 253 aaKnown RBP14.71□□□□□ -0.05
CLIP2-202ENST00000361545 CENPVL3A0A0U1RRI6 287 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 LHBP01229 141 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 ANXA2RQ3ZCQ2 193 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 TSSC4Q9Y5U2 329 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-202ENST00000361545 C2orf16Q68DN1 1984 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 TNFRSF6BO95407 300 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 SPXQ9BT56 116 aa14.71□□□□□ -0.05
CLIP2-202ENST00000361545 HOXD3P31249 432 aaPredicted RBP14.71□□□□□ -0.06
CLIP2-202ENST00000361545 C10orf105Q8TEF2 133 aa14.71□□□□□ -0.06
CLIP2-202ENST00000361545 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 LURAP1LQ8IV03 231 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 RHODO00212 210 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 BLCAPP62952 87 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 OR11H6Q8NGC7 330 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 ADAMTS9Q9P2N4 1935 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 CCL24O00175 119 aa14.7□□□□□ -0.06
CLIP2-202ENST00000361545 TMEM238C9JI98 176 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 PLEKHB2Q96CS7 222 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 PRR25Q96S07 402 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 GHRHP01286 108 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 M0R2P5 195 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 SIGMAR1Q99720 223 aa14.69□□□□□ -0.06
CLIP2-202ENST00000361545 LINC01559Q495D7 138 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 Q8NA96 180 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 GFRA4Q9GZZ7 299 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 IGHV3-38A0A0C4DH36 116 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 PLCE1Q9P212 2302 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 A0A096LPF7 62 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 hDV102S1A0JD36 115 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 ZNF726P1Q15940 193 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 GATD1Q8NB37 220 aa14.68□□□□□ -0.06
CLIP2-202ENST00000361545 IGLC7A0M8Q6 106 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 F6UB75 175 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 SONP18583 2426 aaKnown RBP14.67□□□□□ -0.06
CLIP2-202ENST00000361545 ZNF491Q8N8L2 437 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 ZNRF2Q8NHG8 242 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 C8orf31Q8N9H6 132 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 LY6G5BQ8NDX9 201 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 ANKHD1Q8IWZ3 2542 aaKnown RBP14.67□□□□□ -0.06
CLIP2-202ENST00000361545 ORAOV1Q8WV07 137 aa14.67□□□□□ -0.06
CLIP2-202ENST00000361545 ZNF492Q9P255 531 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms