RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CENPEQ02224 2701 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 SERTM2A0A1B0GWG4 89 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 BUB3O43684 328 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 ZNF138P52744 262 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 C8orf49Q96NF6 230 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 HIF1ANQ9NWT6 349 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 TRBV7-1A0A0A6YYK4 115 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 CLPSL1A2RUU4 121 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 PET117Q6UWS5 81 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 ARL6IP6Q8N6S5 226 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 USP9YO00507 2555 aaPredicted RBP17.45■□□□□ 0.38
LDB1-201ENST00000361198 IGKV2-40A0A087WW87 121 aaPredicted RBP17.45■□□□□ 0.38
LDB1-201ENST00000361198 H3BUX3 64 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 AVPP01185 164 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 IGKV2D-40P01614 121 aaPredicted RBP17.45■□□□□ 0.38
LDB1-201ENST00000361198 IGHG4P01861 327 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 HINT1P49773 126 aaPredicted RBP17.45■□□□□ 0.38
LDB1-201ENST00000361198 ZNF493Q6ZR52 646 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 COX8CQ7Z4L0 72 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 POLQO75417 2590 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 FBN2P35556 2912 aa17.45■□□□□ 0.38
LDB1-201ENST00000361198 HLA-DMBP28068 263 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 S100A7P31151 101 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 CRIP2P52943 208 aaPredicted RBP17.44■□□□□ 0.38
LDB1-201ENST00000361198 ATP5G2Q06055 141 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 MAP1LC3CQ9BXW4 147 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 TMEM191AQ9H0A3 160 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 HSPB8Q9UJY1 196 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 ANKRD17O75179 2603 aaKnown RBP17.44■□□□□ 0.38
LDB1-201ENST00000361198 B4DSR2 109 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 CT45A10P0DMU9 189 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 ORAOV1Q8WV07 137 aa17.44■□□□□ 0.38
LDB1-201ENST00000361198 IGHV3-66A0A0C4DH42 116 aa17.43■□□□□ 0.38
LDB1-201ENST00000361198 UBR5O95071 2799 aaPredicted RBP17.42■□□□□ 0.38
LDB1-201ENST00000361198 IGHV3OR16-13A0A075B7E8 117 aa17.42■□□□□ 0.38
LDB1-201ENST00000361198 IGHV3-74A0A0B4J1X5 117 aa17.42■□□□□ 0.38
LDB1-201ENST00000361198 SRSF1Q07955 248 aaKnown RBP eCLIP17.42■□□□□ 0.38
LDB1-201ENST00000361198 AP5S1Q9NUS5 200 aa17.42■□□□□ 0.38
LDB1-201ENST00000361198 A6NDX4 124 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 EPG5Q9HCE0 2579 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 TRGV3P03979 118 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 RAB9AP51151 201 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 DSCR9P59020 149 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 ZNF843Q8N446 348 aa17.41■□□□□ 0.38
LDB1-201ENST00000361198 hDV102S1A0JD36 115 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 IGF1P05019 195 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 CSN3P07498 182 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 FAM223BA6NKX1 122 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 ZNF207O43670 478 aaKnown RBP17.4■□□□□ 0.38
LDB1-201ENST00000361198 FAM223AQ8IWN6 122 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 VGLL1Q99990 258 aa17.4■□□□□ 0.38
LDB1-201ENST00000361198 IGHV3-49A0A0A0MS15 119 aa17.39■□□□□ 0.37
LDB1-201ENST00000361198 A1L4Q6 167 aa17.39■□□□□ 0.37
LDB1-201ENST00000361198 FBLL1A6NHQ2 334 aaKnown RBP17.39■□□□□ 0.37
LDB1-201ENST00000361198 RELQ04864 619 aaPredicted RBP17.39■□□□□ 0.37
LDB1-201ENST00000361198 LINC01545Q5VT33 79 aa17.39■□□□□ 0.37
LDB1-201ENST00000361198 A0A087X0K7 114 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 IGHG2P01859 326 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 BLCAPP62952 87 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 SAPCD1Q5SSQ6 148 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 Q8TAT8 98 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 PRR25Q96S07 402 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 ZNF747Q9BV97 191 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 U3KQK5 164 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 TMEM189A5PLL7 270 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 LYZL1Q6UWQ5 148 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 PTPN13Q12923 2485 aa17.38■□□□□ 0.37
LDB1-201ENST00000361198 SH2D1AO60880 128 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 COX6B1P14854 86 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 PPIFP30405 207 aaKnown RBP17.37■□□□□ 0.37
LDB1-201ENST00000361198 Q6ZS46 218 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 METTL26Q96S19 204 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 TPPP3Q9BW30 176 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 MS4A6AQ9H2W1 248 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 COX11Q9Y6N1 276 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 HSBP1L1C9JCN9 74 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 SLC25A16P16260 332 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 ZANQ9Y493 2812 aa17.37■□□□□ 0.37
LDB1-201ENST00000361198 FA2HQ7L5A8 372 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 PRSS3P2Q8NHM4 247 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 ATP6V0BQ99437 205 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 SCRT2Q9NQ03 307 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 FAM104BQ5XKR9 115 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 SLC25A34Q6PIV7 304 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 RNF182Q8N6D2 247 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 OR10AG1Q8NH19 301 aa17.36■□□□□ 0.37
LDB1-201ENST00000361198 PRAC2D3DTV9 90 aa17.35■□□□□ 0.37
LDB1-201ENST00000361198 GATA3P23771 443 aa17.35■□□□□ 0.37
LDB1-201ENST00000361198 TRBV12-3P01733 135 aa17.35■□□□□ 0.37
LDB1-201ENST00000361198 ZNF738Q8NE65 137 aa17.35■□□□□ 0.37
LDB1-201ENST00000361198 U3KQE9 123 aa17.35■□□□□ 0.37
LDB1-201ENST00000361198 A0A096LNT2 108 aa17.34■□□□□ 0.37
LDB1-201ENST00000361198 ARL3P36405 182 aa17.34■□□□□ 0.37
LDB1-201ENST00000361198 TP73-AS1Q9UF72 201 aa17.34■□□□□ 0.37
LDB1-201ENST00000361198 TMSB15BA0A087X1C1 80 aa17.33■□□□□ 0.37
LDB1-201ENST00000361198 TMEM213A2RRL7 107 aa17.33■□□□□ 0.37
LDB1-201ENST00000361198 MCRIP2Q9BUT9 160 aaKnown RBP17.33■□□□□ 0.37
LDB1-201ENST00000361198 PPP1R14DQ9NXH3 145 aa17.33■□□□□ 0.37
LDB1-201ENST00000361198 D6R8Y8 96 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms