RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 FLI1Q01543 452 aaPredicted RBP16.33■□□□□ 0.21
HOXA4-201ENST00000360046 ERCC8Q13216 396 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 Q86TA4 180 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 OR10J6PQ8NGY7 276 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 IGF2BP2-AS1Q96M15 143 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 PSG8Q9UQ74 426 aa16.33■□□□□ 0.21
HOXA4-201ENST00000360046 C9JCJ5 164 aa16.33■□□□□ 0.2
HOXA4-201ENST00000360046 NHLRC2Q8NBF2 726 aa16.33■□□□□ 0.2
HOXA4-201ENST00000360046 AURKAIP1Q9NWT8 199 aaPredicted RBP16.33■□□□□ 0.2
HOXA4-201ENST00000360046 DEFB131AP59861 70 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 HIST1H1AQ02539 215 aaPredicted RBP16.32■□□□□ 0.2
HOXA4-201ENST00000360046 BAGE2Q86Y30 109 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 OR8A1Q8NGG7 326 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 Q8TAT8 98 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 TVP23CQ96ET8 276 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 ASCL2Q99929 193 aa16.32■□□□□ 0.2
HOXA4-201ENST00000360046 M0R036 132 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 ADIRFQ15847 76 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 MAP6D1Q9H9H5 199 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 SDF2L1Q9HCN8 221 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 LTAP01374 205 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 CLRN3Q8NCR9 226 aa16.31■□□□□ 0.2
HOXA4-201ENST00000360046 FBLL1A6NHQ2 334 aaKnown RBP16.3■□□□□ 0.2
HOXA4-201ENST00000360046 EBLN2Q6P2I7 272 aa16.3■□□□□ 0.2
HOXA4-201ENST00000360046 OCC1Q8TAD7 63 aa16.3■□□□□ 0.2
HOXA4-201ENST00000360046 AGPAT4-IT1Q9H0P7 198 aa16.3■□□□□ 0.2
HOXA4-201ENST00000360046 TRBV6-1A0A0K0K1D8 114 aa16.29■□□□□ 0.2
HOXA4-201ENST00000360046 MGST1P10620 155 aaKnown RBP16.29■□□□□ 0.2
HOXA4-201ENST00000360046 RPL23P62829 140 aaKnown RBP16.29■□□□□ 0.2
HOXA4-201ENST00000360046 PRR31Q5SQ13 230 aa16.29■□□□□ 0.2
HOXA4-201ENST00000360046 GDF5OSQ5U4N7 250 aa16.29■□□□□ 0.2
HOXA4-201ENST00000360046 C9orf47Q6ZRZ4 202 aa16.29■□□□□ 0.2
HOXA4-201ENST00000360046 LINC01551Q86U37 167 aa16.29■□□□□ 0.2
HOXA4-201ENST00000360046 PNRC1Q12796 327 aaPredicted RBP16.28■□□□□ 0.2
HOXA4-201ENST00000360046 ODF3L2Q3SX64 289 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 NPIPB6E9PJ23 425 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 ZNF138P52744 262 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 FOXI2Q6ZQN5 318 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 SAV1Q9H4B6 383 aaPredicted RBP16.28■□□□□ 0.2
HOXA4-201ENST00000360046 ZFP30Q9Y2G7 519 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 LY96Q9Y6Y9 160 aa16.28■□□□□ 0.2
HOXA4-201ENST00000360046 A0A0J9YX75 114 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 OR11H12B2RN74 326 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 IGLV2-8P01709 118 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 ZNF124Q15973 351 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 BEAN1Q3B7T3 259 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 APRG1Q8IVJ8 170 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 NDFIP1Q9BT67 221 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 GPR61Q9BZJ8 451 aa16.27■□□□□ 0.19
HOXA4-201ENST00000360046 KNCNA6PVL3 124 aa16.26■□□□□ 0.19
HOXA4-201ENST00000360046 K7EN84 100 aa16.26■□□□□ 0.19
HOXA4-201ENST00000360046 ACTL10Q5JWF8 245 aa16.26■□□□□ 0.19
HOXA4-201ENST00000360046 LINC00477Q96M19 166 aa16.26■□□□□ 0.19
HOXA4-201ENST00000360046 PRR25Q96S07 402 aa16.26■□□□□ 0.19
HOXA4-201ENST00000360046 CD7P09564 240 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 SAPCD1Q5SSQ6 148 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 TMEM183AQ8IXX5 376 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 SMIM12Q96EX1 92 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 C8orf49Q96NF6 230 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 ZNF492Q9P255 531 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 AGRNO00468 2067 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 IGKV3-20P01619 116 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 CMC4P56277 68 aaPredicted RBP16.25■□□□□ 0.19
HOXA4-201ENST00000360046 OR5I1Q13606 314 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 OXLD1Q5BKU9 147 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 PRR27Q6MZM9 219 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 OR4B1Q8NGF8 309 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 MLST8Q9BVC4 326 aa16.25■□□□□ 0.19
HOXA4-201ENST00000360046 DUSP14O95147 198 aaKnown RBP16.24■□□□□ 0.19
HOXA4-201ENST00000360046 CT45A10P0DMU9 189 aa16.24■□□□□ 0.19
HOXA4-201ENST00000360046 PPP1R14DQ9NXH3 145 aa16.24■□□□□ 0.19
HOXA4-201ENST00000360046 CMYA5Q8N3K9 4069 aa16.24■□□□□ 0.19
HOXA4-201ENST00000360046 ISOC2Q96AB3 205 aa16.23■□□□□ 0.19
HOXA4-201ENST00000360046 WIPF1O43516 503 aa16.22■□□□□ 0.19
HOXA4-201ENST00000360046 HLA-DRB4P13762 266 aa16.22■□□□□ 0.19
HOXA4-201ENST00000360046 GTSCR1Q86UQ5 136 aa16.22■□□□□ 0.19
HOXA4-201ENST00000360046 ZC2HC1AQ96GY0 325 aa16.22■□□□□ 0.19
HOXA4-201ENST00000360046 HLA-DRB4X5D2U9 266 aa16.22■□□□□ 0.19
HOXA4-201ENST00000360046 GCGP01275 180 aa16.21■□□□□ 0.19
HOXA4-201ENST00000360046 RHEBQ15382 184 aa16.21■□□□□ 0.19
HOXA4-201ENST00000360046 C7orf77A4D0Y5 90 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 B4DEV8 164 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 H3BMM0 161 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 J3KRW8 73 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 SMUG1Q53HV7 270 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 FAM110AQ9BQ89 295 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 WFDC10AQ9H1F0 79 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 RPS10P5Q9NQ39 176 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 BIN3Q9NQY0 253 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 LENEPQ9Y5L5 61 aa16.2■□□□□ 0.18
HOXA4-201ENST00000360046 ERVFC1-1P60608 527 aa16.19■□□□□ 0.18
HOXA4-201ENST00000360046 SFRP2Q96HF1 295 aa16.19■□□□□ 0.18
HOXA4-201ENST00000360046 RNASE7Q9H1E1 156 aaKnown RBP16.19■□□□□ 0.18
HOXA4-201ENST00000360046 SMCO4Q9NRQ5 59 aa16.19■□□□□ 0.18
HOXA4-201ENST00000360046 RNF212Q495C1 297 aa16.19■□□□□ 0.18
HOXA4-201ENST00000360046 C19orf73Q9NVV2 129 aa16.19■□□□□ 0.18
HOXA4-201ENST00000360046 MT-ND4LP03901 98 aa16.18■□□□□ 0.18
HOXA4-201ENST00000360046 STHQ8IWL8 128 aa16.18■□□□□ 0.18
HOXA4-201ENST00000360046 IBA57Q5T440 356 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms