RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 IGHV3-49A0A0A0MS15 119 aa14.03□□□□□ -0.16
PDLIM7-203ENST00000359895 KRTAP10-9P60411 292 aa14.03□□□□□ -0.16
PDLIM7-203ENST00000359895 Q6ZS46 218 aa14.03□□□□□ -0.16
PDLIM7-203ENST00000359895 KLK15Q9H2R5 256 aa14.03□□□□□ -0.16
PDLIM7-203ENST00000359895 FBN2P35556 2912 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 LOC102724200A0A096LPH7 203 aaPredicted RBP14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 TRAV8-2A0A0B4J237 113 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 TRBV12-3P01733 135 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 ARMS2P0C7Q2 107 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 Q5PR19 223 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 RNF182Q8N6D2 247 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 Q8TAT8 98 aa14.02□□□□□ -0.16
PDLIM7-203ENST00000359895 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
PDLIM7-203ENST00000359895 FABP5P3A8MUU1 101 aa14.01□□□□□ -0.17
PDLIM7-203ENST00000359895 IGHV3-11P01762 117 aa14.01□□□□□ -0.17
PDLIM7-203ENST00000359895 DMRTA1Q5VZB9 504 aa14.01□□□□□ -0.17
PDLIM7-203ENST00000359895 NPFFR1Q9GZQ6 430 aa14.01□□□□□ -0.17
PDLIM7-203ENST00000359895 PRAC2D3DTV9 90 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 PMCHP20382 165 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 MAPK1IP1LQ8NDC0 245 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 C16orf92Q96LL3 132 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 NRN1Q9NPD7 142 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 PPP1R14DQ9NXH3 145 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 MAST4O15021 2626 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 NAV2Q8IVL1 2488 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 ANKRD17O75179 2603 aaKnown RBP14□□□□□ -0.17
PDLIM7-203ENST00000359895 HSBP1O75506 76 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF705DP0CH99 300 aaPredicted RBP14□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF705BP0CI00 300 aaPredicted RBP14□□□□□ -0.17
PDLIM7-203ENST00000359895 ERCC8Q13216 396 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 TMEM78Q5T7P6 136 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 CYB5R2Q6BCY4 276 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 PRSS57Q6UWY2 283 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF80P51504 273 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF138P52744 262 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 CTAG1AP78358 180 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 LYZL1Q6UWQ5 148 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 Q6YL49 198 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 C9orf47Q6ZRZ4 202 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 ZNF664Q8N3J9 261 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 PRO1933Q9H354 126 aa13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 PEF1Q9UBV8 284 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-203ENST00000359895 ABCA12Q86UK0 2595 aa13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 PSMB8P28062 276 aa13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 CHCHD1Q96BP2 118 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 TPPP3Q9BW30 176 aa13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 AGPAT4-IT1Q9H0P7 198 aa13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 PRRC2AP48634 2157 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-203ENST00000359895 TMSB15BA0A087X1C1 80 aa13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 K7EMT4 169 aa13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 SMAD7O15105 426 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 DDTP30046 118 aa13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 CTRLP40313 264 aa13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 HIST1H1AQ02539 215 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 NIT1Q86X76 327 aa13.97□□□□□ -0.17
PDLIM7-203ENST00000359895 IGHV7-4-1A0A0J9YVY3 117 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 NTF3P20783 257 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 LINC01559Q495D7 138 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 FAM106AQ4KMX7 169 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 FER1L6-AS1Q8NA97 138 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 DAZ1Q9NQZ3 744 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 LENEPQ9Y5L5 61 aa13.96□□□□□ -0.17
PDLIM7-203ENST00000359895 ORM1P02763 201 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 IGLC6P0CF74 106 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 KRTDAPP60985 99 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 DEFA6Q01524 100 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 TEX43Q6ZNM6 134 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 Q96MF0 132 aa13.96□□□□□ -0.18
PDLIM7-203ENST00000359895 APCP25054 2843 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 M0R2Z0 102 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 OVOL1O14753 267 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 RAB4AP20338 218 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 TMEM95Q3KNT9 176 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 LCNL1Q6ZST4 164 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 GPHB5Q86YW7 130 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 FAM19A2Q8N3H0 131 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 ZNF738Q8NE65 137 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 CSMD2Q7Z408 3487 aa13.95□□□□□ -0.18
PDLIM7-203ENST00000359895 ITPR2Q14571 2701 aa13.94□□□□□ -0.18
PDLIM7-203ENST00000359895 CD33P20138 364 aa13.94□□□□□ -0.18
PDLIM7-203ENST00000359895 LINC00477Q96M19 166 aa13.94□□□□□ -0.18
PDLIM7-203ENST00000359895 SOCS3O14543 225 aa13.93□□□□□ -0.18
PDLIM7-203ENST00000359895 SAMD13Q5VXD3 122 aa13.93□□□□□ -0.18
PDLIM7-203ENST00000359895 RHPN1-AS1Q9BWJ2 59 aa13.93□□□□□ -0.18
PDLIM7-203ENST00000359895 SMPXQ9UHP9 88 aa13.93□□□□□ -0.18
PDLIM7-203ENST00000359895 LINC00614P0C842 121 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 PRR31Q5SQ13 230 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 UFC1Q9Y3C8 167 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 KIR2DL5BA0A0G2JN68 375 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 KIR2DL5BA0A0G2JPC4 375 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 ELANEP08246 267 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 C3orf79P0CE67 100 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 FOXE3Q13461 319 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 FAM104BQ5XKR9 115 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms