RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 CEACAM4O75871 244 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 K7ERJ3 54 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
NCDN-201ENST00000356090 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
NCDN-201ENST00000356090 A0A1B0GW15 77 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 IGFL3Q6UXB1 125 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 A0A096LNJ9 63 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 CRYGBP07316 175 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 FABP2P12104 132 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
NCDN-201ENST00000356090 HSD52Q0P140 79 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 PRR25Q96S07 402 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
NCDN-201ENST00000356090 NDUFS7O75251 213 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 TMEM95Q3KNT9 176 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 ARPC1AQ92747 370 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 NHP2Q9NX24 153 aaKnown RBP10.46□□□□□ -0.73
NCDN-201ENST00000356090 B9A039 149 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
NCDN-201ENST00000356090 CEACAM3P40198 252 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 ZNF672Q499Z4 452 aaPredicted RBP10.46□□□□□ -0.73
NCDN-201ENST00000356090 C8orf31Q8N9H6 132 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 COL25A1Q9BXS0 654 aaPredicted RBP10.46□□□□□ -0.73
NCDN-201ENST00000356090 RAB1BQ9H0U4 201 aa10.46□□□□□ -0.73
NCDN-201ENST00000356090 C9orf118A6NHY6 69 aa10.46□□□□□ -0.74
NCDN-201ENST00000356090 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 SPRY2O43597 315 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 MTURNQ8N3F0 131 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 GOSR1O95249 250 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 LYPD1Q8N2G4 141 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 CSTL1Q9H114 145 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
NCDN-201ENST00000356090 SCGB2A1O75556 95 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 RELNP78509 3460 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 A6NJY4 79 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 SMIM13P0DJ93 91 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
NCDN-201ENST00000356090 H3BRM9 83 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 NDPQ00604 133 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 FABP5P3A8MUU1 101 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 PRAC2D3DTV9 90 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 TNFRSF13BO14836 293 aaPredicted RBP10.43□□□□□ -0.74
NCDN-201ENST00000356090 NDUFA3O95167 84 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 TNFRSF6BO95407 300 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 SPANXN1Q5VSR9 72 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 BOD1L2Q8IYS8 172 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 OR4X2Q8NGF9 303 aa10.43□□□□□ -0.74
NCDN-201ENST00000356090 IGKV2D-26A0A0A0MRZ7 120 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 PPBPP02775 128 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 FGF6P10767 208 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 FXYD2P54710 66 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 RPL11P62913 178 aaKnown RBP10.42□□□□□ -0.74
NCDN-201ENST00000356090 FANCD2OSQ96PS1 177 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 K7EP34 96 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 SFTA2Q6UW10 78 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
NCDN-201ENST00000356090 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
NCDN-201ENST00000356090 TRAV40A0A0B4J280 105 aa10.41□□□□□ -0.74
NCDN-201ENST00000356090 CLEC3BP05452 202 aa10.41□□□□□ -0.74
NCDN-201ENST00000356090 CLEC19AQ6UXS0 136 aa10.41□□□□□ -0.74
NCDN-201ENST00000356090 LINC00527Q9UJ94 153 aa10.41□□□□□ -0.74
NCDN-201ENST00000356090 ASH1LQ9NR48 2969 aaKnown RBP10.41□□□□□ -0.74
NCDN-201ENST00000356090 ZNF292O60281 2723 aa10.41□□□□□ -0.74
NCDN-201ENST00000356090 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 IGKCP01834 107 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 RPS20P60866 119 aaKnown RBP10.4□□□□□ -0.74
NCDN-201ENST00000356090 PDE6HQ13956 83 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 C15orf32Q32M92 178 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 CHAC1Q9BUX1 264 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 TMEM8BA6NDV4 472 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.74
NCDN-201ENST00000356090 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
NCDN-201ENST00000356090 WI2-2373I1.2A0A1W2PRP0 233 aa10.4□□□□□ -0.75
NCDN-201ENST00000356090 AGRNO00468 2067 aa10.4□□□□□ -0.75
NCDN-201ENST00000356090 EFNA4P52798 201 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 HIST1H4GQ99525 98 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 M0R381 172 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 TRGV3P03979 118 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 PAX2Q02962 417 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 FOXC1Q12948 553 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 TMEM78Q5T7P6 136 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 WFDC12Q8WWY7 111 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms