RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.7
TRIM4-203ENST00000355947 C2CD3Q4AC94 2353 aa10.71□□□□□ -0.7
TRIM4-203ENST00000355947 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 APOBEC3AP31941 199 aaPredicted RBP10.7□□□□□ -0.7
TRIM4-203ENST00000355947 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
TRIM4-203ENST00000355947 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 EMP1P54849 157 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 ECSCRQ19T08 205 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
TRIM4-203ENST00000355947 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 CYSLTR1Q9Y271 337 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 LGALS9BQ3B8N2 356 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 LGALS9CQ6DKI2 356 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 CUL9Q8IWT3 2517 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 MBD3L4A6NDZ8 208 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-203ENST00000355947 MBD3L3A6NE82 208 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-203ENST00000355947 MBD3L5A6NJ08 208 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-203ENST00000355947 IGKCP01834 107 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 FTH1P19P0C7X4 201 aa10.69□□□□□ -0.7
TRIM4-203ENST00000355947 MBD3L2Q8NHZ7 208 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-203ENST00000355947 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
TRIM4-203ENST00000355947 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 PRRG2O14669 202 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 GFRALQ6UXV0 394 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 TRBV25-1A0A075B6N4 114 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 CRYGCP07315 174 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 ZNF502Q8TBZ5 544 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 RNASE6Q93091 150 aaKnown RBP10.68□□□□□ -0.7
TRIM4-203ENST00000355947 SIGMAR1Q99720 223 aa10.68□□□□□ -0.7
TRIM4-203ENST00000355947 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
TRIM4-203ENST00000355947 SPANXN1Q5VSR9 72 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 TEX36Q5VZQ5 186 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 OR5A1Q8NGJ0 315 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 LINC01560Q8TB33 94 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 H3BVH4 76 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 I3L2K1 104 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 K7EIM0 57 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 APOMO95445 188 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 INSL3P51460 131 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 TMEM155Q4W5P6 130 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 MYOZ3Q8TDC0 251 aa10.67□□□□□ -0.7
TRIM4-203ENST00000355947 BUB1B-PAK6H3BSN5 160 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 M0R381 172 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 Q6ZQT7 251 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 ABHD17AQ96GS6 310 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 PRR25Q96S07 402 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 FAM90A27PA6NNH2 459 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 H7C2G1 150 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 TRGV3P03979 118 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 MGPP08493 103 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 MRGPRG-AS1Q2M3A8 158 aa10.66□□□□□ -0.7
TRIM4-203ENST00000355947 H3BRN7 92 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 J3QR89 54 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 SMIM17P0DL12 118 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM4-203ENST00000355947 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 DPM2O94777 84 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 MFAP4P55083 255 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 RBPJQ06330 500 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 C21orf62Q9NYP8 219 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 Q9UFV3 132 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 LINC00527Q9UJ94 153 aa10.65□□□□□ -0.7
TRIM4-203ENST00000355947 MAPKAPK5-AS1Q8N8E1 139 aa10.65□□□□□ -0.71
TRIM4-203ENST00000355947 ZNF883P0CG24 379 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
TRIM4-203ENST00000355947 NDPQ00604 133 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 Q6AWC8 147 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 NACAE9PAV3 2078 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 DEFB1P60022 68 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 TTC9CQ8N5M4 171 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
TRIM4-203ENST00000355947 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
TRIM4-203ENST00000355947 BMI1P35226 326 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 TMEM30BQ3MIR4 351 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 NEGR1Q7Z3B1 354 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 GLMPQ8WWB7 406 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
TRIM4-203ENST00000355947 NCOR2Q9Y618 2525 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 PTPRQQ9UMZ3 2332 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 CIDEAO60543 219 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
TRIM4-203ENST00000355947 ODF1Q14990 250 aa10.63□□□□□ -0.71
TRIM4-203ENST00000355947 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms