RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
LMX1B-201ENST00000355497 HLA-DMBP28068 263 aa11.9□□□□□ -0.5
LMX1B-201ENST00000355497 CRYBA4P53673 196 aa11.9□□□□□ -0.5
LMX1B-201ENST00000355497 IGKV1-6A0A0C4DH72 117 aa11.9□□□□□ -0.51
LMX1B-201ENST00000355497 C15orf53Q8NAA6 179 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 Q8TCH9 128 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 C9JQL5 133 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 G3V318 75 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 ZNF134P52741 427 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
LMX1B-201ENST00000355497 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 RALGAPA1Q6GYQ0 2036 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 J3QQQ9 107 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 DEFB105AQ8NG35 78 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 Q6ZS92 163 aa11.89□□□□□ -0.51
LMX1B-201ENST00000355497 CRYGCP07315 174 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 IGHV2-70DA0A0C4DH43 119 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 IGHG2P01859 326 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 GBF1Q92538 1859 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 LOC285556D6RIA3 1793 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 F8VRH5 84 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 NPYP01303 97 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 IGLL1P15814 213 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
LMX1B-201ENST00000355497 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 K7ERJ3 54 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
LMX1B-201ENST00000355497 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
LMX1B-201ENST00000355497 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 RS1O15537 224 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 RP1P56715 2156 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 C20orf78Q9BR46 151 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 SIVA1O15304 175 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
LMX1B-201ENST00000355497 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
LMX1B-201ENST00000355497 NYNRINQ9P2P1 1898 aaKnown RBP11.86□□□□□ -0.51
LMX1B-201ENST00000355497 LMO1P25800 156 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 ZC2HC1AQ96GY0 325 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 E9PQ18 207 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 NPSP0C0P6 89 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 UBE2BP63146 152 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 CFHR4Q92496 578 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 A0A096LPF7 62 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 IGKV1-39P01597 117 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 IGKV1D-39P04432 117 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
LMX1B-201ENST00000355497 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
LMX1B-201ENST00000355497 H3BMG7 143 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 PRB2P02812 416 aaPredicted RBP11.85□□□□□ -0.51
LMX1B-201ENST00000355497 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 CLPSL2Q6UWE3 100 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 MYOFQ9NZM1 2061 aa11.85□□□□□ -0.51
LMX1B-201ENST00000355497 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 RNASE13Q5GAN3 156 aaKnown RBP11.84□□□□□ -0.51
LMX1B-201ENST00000355497 PDCD11Q14690 1871 aaKnown RBP11.84□□□□□ -0.51
LMX1B-201ENST00000355497 Q96MF0 132 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 VOPP1Q96AW1 172 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 IGHV7-4-1A0A0J9YVY3 117 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 WIPF3A6NGB9 483 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 NDUFS7O75251 213 aa11.84□□□□□ -0.51
LMX1B-201ENST00000355497 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
LMX1B-201ENST00000355497 MAPK1IP1LQ8NDC0 245 aa11.83□□□□□ -0.52
LMX1B-201ENST00000355497 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
LMX1B-201ENST00000355497 BAALCQ8WXS3 180 aa11.83□□□□□ -0.52
LMX1B-201ENST00000355497 NTN5Q8WTR8 489 aaPredicted RBP11.83□□□□□ -0.52
LMX1B-201ENST00000355497 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
LMX1B-201ENST00000355497 LINC00311Q8N616 119 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 K7EM74 188 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 RHOHQ15669 191 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 DKK2Q9UBU2 259 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 J3QLI3 93 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 SVIPQ8NHG7 77 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
LMX1B-201ENST00000355497 SEC16AO15027 2179 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 IGHV2-70P01814 119 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 IGKV2D-24A0A075B6R9 120 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 CFC1P0CG37 223 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 XCL1P47992 114 aa11.81□□□□□ -0.52
LMX1B-201ENST00000355497 LOXP28300 417 aaPredicted RBP11.81□□□□□ -0.52
LMX1B-201ENST00000355497 F6UB75 175 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 IGKV1OR2-108A0A075B7D4 117 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 LTAP01374 205 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 SVILO95425 2214 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms