RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 MBP02144 154 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 LIPFP07098 398 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 CRYBB3P26998 211 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 SAA4P35542 130 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 MEOX2P50222 304 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 KRTAP10-3P60369 221 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ERVFC1-1P60608 527 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 SSTP61278 116 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 GNG5P63218 68 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 LCN2P80188 198 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 Q5PR19 223 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 AKR1C8PQ5T2L2 129 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 LEMD1Q68G75 181 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
VPS54-202ENST00000354504 Q86TA4 180 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TGIF2LXQ8IUE1 241 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TMEM75Q8N9X5 138 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 OR4A16Q8NH70 328 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TMEM190Q8WZ59 177 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TMEM68Q96MH6 324 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TXNDC17Q9BRA2 123 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 OSTCQ9NRP0 149 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 IL36BQ9NZH7 164 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ONECUT1Q9UBC0 465 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 HILPDAQ9Y5L2 63 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 KIF25-AS1Q9Y6Z4 181 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 MAST4O15021 2626 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 RYR3Q15413 4870 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TRAV9-1A0A075B6T8 112 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 IGHV3-35A0A0C4DH35 117 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 PCP4L1A6NKN8 68 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 OOSP1A8MZH6 123 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ATP6V0E1O15342 81 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 NDUFB3O43676 98 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 NXPH4O95158 308 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 HBE1P02100 147 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 C8orf88P0DMB2 117 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 HLA-DMBP28068 263 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ERVK-16P61578 105 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 EIF5AP63241 154 aaKnown RBP1.72□□□□□ -2.13
VPS54-202ENST00000354504 FABP9Q0Z7S8 132 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TIGITQ495A1 244 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 LRRC10Q5BKY1 277 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 SOHLH1Q5JUK2 328 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 UNQ9165/PRO28630Q6UXU0 137 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ZNF600Q6ZNG1 722 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TEX43Q6ZNM6 134 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 Q75L30 129 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 C1orf87Q8N0U7 546 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ZNF709Q8N972 641 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 NUP35Q8NFH5 326 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ATP6V0BQ99437 205 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ASCL2Q99929 193 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 GPR61Q9BZJ8 451 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 ZNF702PQ9H963 129 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 UBTD1Q9HAC8 227 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 RPS10P5Q9NQ39 176 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 TNFRSF19Q9NS68 423 aa1.72□□□□□ -2.13
VPS54-202ENST00000354504 RYR2Q92736 4967 aa1.71□□□□□ -2.13
VPS54-202ENST00000354504 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 KMT2CQ8NEZ4 4911 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 IGHV4-4A0A075B6R2 117 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 PIGBOS1A0A0B4J2F0 54 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 DNAJC9-AS1A6NH13 148 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 F6UZH7 168 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ZNF253O75346 499 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 CA1P00915 261 aaPredicted RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 TCRAP04437 139 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 FAM106CPP0CH98 169 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1A1P0DJD3 496 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1CP0DJD4 496 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 IGHV4-31P0DP07 118 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 UBE2G2P60604 165 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 RBMY1FQ15415 496 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 MMDQ15546 238 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 TMEM241Q24JQ0 296 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ACOT6Q3I5F7 207 aaPredicted RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 FAM106AQ4KMX7 169 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 CENPWQ5EE01 88 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 CST9LP1Q5W188 147 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 LINC00305Q7Z4B0 112 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 SPATA3Q8NHX4 192 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 DCANP1Q8TF63 244 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 ACY3Q96HD9 319 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 TCEAL7Q9BRU2 100 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 FAM103A1Q9BTL3 118 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 ENY2Q9NPA8 101 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 FKBP11Q9NYL4 201 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 S4R3C0 116 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 NBEAL1Q6ZS30 2694 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 TENM3Q9P273 2699 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 MEGF8Q7Z7M0 2845 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 LOC105371242A0A075B767 164 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 IGHV3OR16-8A0A075B7F1 116 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 IGKV3D-20A0A0C4DH25 116 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 NCBP2LA6PVI3 153 aaKnown RBP1.71□□□□□ -2.14
VPS54-202ENST00000354504 CNIH1O95406 144 aa1.71□□□□□ -2.14
VPS54-202ENST00000354504 HNF1AP20823 631 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms