RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 H3BMG7 143 aa13.97□□□□□ -0.17
APP-202ENST00000348990 NDUFA3O95167 84 aa13.97□□□□□ -0.17
APP-202ENST00000348990 TNFRSF6BO95407 300 aa13.97□□□□□ -0.17
APP-202ENST00000348990 HOXB4P17483 251 aaPredicted RBP13.97□□□□□ -0.17
APP-202ENST00000348990 SCGB2A2Q13296 93 aa13.97□□□□□ -0.17
APP-202ENST00000348990 AGRNO00468 2067 aa13.97□□□□□ -0.17
APP-202ENST00000348990 GFRALQ6UXV0 394 aa13.97□□□□□ -0.17
APP-202ENST00000348990 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
APP-202ENST00000348990 ZNF479Q96JC4 524 aa13.97□□□□□ -0.17
APP-202ENST00000348990 IGHV3-66A0A0C4DH42 116 aa13.96□□□□□ -0.17
APP-202ENST00000348990 ERCC8Q13216 396 aa13.96□□□□□ -0.17
APP-202ENST00000348990 SFTA2Q6UW10 78 aa13.96□□□□□ -0.17
APP-202ENST00000348990 DPM2O94777 84 aa13.96□□□□□ -0.17
APP-202ENST00000348990 MFAP4P55083 255 aa13.96□□□□□ -0.17
APP-202ENST00000348990 IGFL2Q6UWQ7 119 aa13.96□□□□□ -0.17
APP-202ENST00000348990 DLX6P56179 175 aa13.96□□□□□ -0.18
APP-202ENST00000348990 MYOZ3Q8TDC0 251 aa13.96□□□□□ -0.18
APP-202ENST00000348990 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
APP-202ENST00000348990 CRYGBP07316 175 aa13.95□□□□□ -0.18
APP-202ENST00000348990 RPL7P18124 248 aaKnown RBP13.95□□□□□ -0.18
APP-202ENST00000348990 ODF1Q14990 250 aa13.95□□□□□ -0.18
APP-202ENST00000348990 TRBV6-1A0A0K0K1D8 114 aa13.94□□□□□ -0.18
APP-202ENST00000348990 U3KQK5 164 aa13.94□□□□□ -0.18
APP-202ENST00000348990 SPENQ96T58 3664 aaKnown RBP13.94□□□□□ -0.18
APP-202ENST00000348990 COL27A1Q8IZC6 1860 aaPredicted RBP13.94□□□□□ -0.18
APP-202ENST00000348990 MRPL35Q9NZE8 188 aaKnown RBP13.94□□□□□ -0.18
APP-202ENST00000348990 J3KRW8 73 aa13.94□□□□□ -0.18
APP-202ENST00000348990 PRRG2O14669 202 aa13.94□□□□□ -0.18
APP-202ENST00000348990 FTH1P19P0C7X4 201 aa13.94□□□□□ -0.18
APP-202ENST00000348990 ZNF562Q6V9R5 426 aa13.94□□□□□ -0.18
APP-202ENST00000348990 C8orf31Q8N9H6 132 aa13.94□□□□□ -0.18
APP-202ENST00000348990 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
APP-202ENST00000348990 ZZEF1O43149 2961 aa13.93□□□□□ -0.18
APP-202ENST00000348990 WI2-2373I1.2A0A1W2PRP0 233 aa13.93□□□□□ -0.18
APP-202ENST00000348990 SMIM17P0DL12 118 aa13.93□□□□□ -0.18
APP-202ENST00000348990 IGHV3-49A0A0A0MS15 119 aa13.93□□□□□ -0.18
APP-202ENST00000348990 TRAV26-2A0A0B4J265 109 aa13.93□□□□□ -0.18
APP-202ENST00000348990 C3orf36Q3SXR2 165 aa13.93□□□□□ -0.18
APP-202ENST00000348990 NXT2Q9NPJ8 142 aaKnown RBP13.93□□□□□ -0.18
APP-202ENST00000348990 FABP5P3A8MUU1 101 aa13.92□□□□□ -0.18
APP-202ENST00000348990 IGLV1-47P01700 117 aa13.92□□□□□ -0.18
APP-202ENST00000348990 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
APP-202ENST00000348990 C21orf62Q9NYP8 219 aa13.92□□□□□ -0.18
APP-202ENST00000348990 GAGE12HA6NDE8 117 aa13.92□□□□□ -0.18
APP-202ENST00000348990 CEND1Q8N111 149 aa13.92□□□□□ -0.18
APP-202ENST00000348990 RAB1BQ9H0U4 201 aa13.92□□□□□ -0.18
APP-202ENST00000348990 TTC9CQ8N5M4 171 aa13.92□□□□□ -0.18
APP-202ENST00000348990 DEFB123Q8N688 67 aa13.92□□□□□ -0.18
APP-202ENST00000348990 A0A0G2JNJ9 132 aa13.91□□□□□ -0.18
APP-202ENST00000348990 NBR2O15453 112 aa13.91□□□□□ -0.18
APP-202ENST00000348990 PLA2G2CQ5R387 149 aa13.91□□□□□ -0.18
APP-202ENST00000348990 Q9UFV3 132 aa13.91□□□□□ -0.18
APP-202ENST00000348990 ATMQ13315 3056 aa13.91□□□□□ -0.18
APP-202ENST00000348990 PDE6HQ13956 83 aa13.91□□□□□ -0.18
APP-202ENST00000348990 RNF182Q8N6D2 247 aa13.91□□□□□ -0.18
APP-202ENST00000348990 A0A1B0GWB2 263 aa13.91□□□□□ -0.18
APP-202ENST00000348990 HHLA3Q9XRX5 114 aa13.91□□□□□ -0.18
APP-202ENST00000348990 EFNA4P52798 201 aa13.9□□□□□ -0.18
APP-202ENST00000348990 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
APP-202ENST00000348990 HIF1ANQ9NWT6 349 aa13.9□□□□□ -0.18
APP-202ENST00000348990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
APP-202ENST00000348990 TNFRSF14Q92956 283 aa13.9□□□□□ -0.18
APP-202ENST00000348990 OTOGLQ3ZCN5 2332 aa13.9□□□□□ -0.18
APP-202ENST00000348990 IGLL5B9A064 214 aa13.89□□□□□ -0.19
APP-202ENST00000348990 KLRD1Q13241 179 aa13.89□□□□□ -0.19
APP-202ENST00000348990 CD300EQ496F6 205 aaPredicted RBP13.89□□□□□ -0.19
APP-202ENST00000348990 MAPKAPK5-AS1Q8N8E1 139 aa13.89□□□□□ -0.19
APP-202ENST00000348990 ANKRD11Q6UB99 2663 aaPredicted RBP13.89□□□□□ -0.19
APP-202ENST00000348990 ANKHD1Q8IWZ3 2542 aaKnown RBP13.89□□□□□ -0.19
APP-202ENST00000348990 DMXL1Q9Y485 3027 aa13.89□□□□□ -0.19
APP-202ENST00000348990 CEACAM4O75871 244 aa13.89□□□□□ -0.19
APP-202ENST00000348990 FAM57AQ8TBR7 257 aa13.89□□□□□ -0.19
APP-202ENST00000348990 WFDC12Q8WWY7 111 aa13.89□□□□□ -0.19
APP-202ENST00000348990 MRPS12O15235 138 aaKnown RBP13.89□□□□□ -0.19
APP-202ENST00000348990 ATP5LO75964 103 aa13.89□□□□□ -0.19
APP-202ENST00000348990 THBDP07204 575 aa13.89□□□□□ -0.19
APP-202ENST00000348990 GAGE13Q4V321 117 aa13.89□□□□□ -0.19
APP-202ENST00000348990 SPANXN1Q5VSR9 72 aa13.89□□□□□ -0.19
APP-202ENST00000348990 LY6HO94772 140 aa13.88□□□□□ -0.19
APP-202ENST00000348990 RNF185Q96GF1 192 aa13.88□□□□□ -0.19
APP-202ENST00000348990 CYSLTR1Q9Y271 337 aa13.88□□□□□ -0.19
APP-202ENST00000348990 E7EQL1 145 aa13.88□□□□□ -0.19
APP-202ENST00000348990 C12orf74Q32Q52 190 aa13.88□□□□□ -0.19
APP-202ENST00000348990 PRAC2D3DTV9 90 aa13.88□□□□□ -0.19
APP-202ENST00000348990 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
APP-202ENST00000348990 DYNAPQ8N1N2 210 aa13.88□□□□□ -0.19
APP-202ENST00000348990 FOXI2Q6ZQN5 318 aa13.87□□□□□ -0.19
APP-202ENST00000348990 SVIPQ8NHG7 77 aa13.87□□□□□ -0.19
APP-202ENST00000348990 KAAG1Q9UBP8 84 aa13.87□□□□□ -0.19
APP-202ENST00000348990 TRGV3P03979 118 aa13.87□□□□□ -0.19
APP-202ENST00000348990 DPM3Q9P2X0 92 aa13.87□□□□□ -0.19
APP-202ENST00000348990 LOC107984156A0A0G2JMH3 177 aa13.86□□□□□ -0.19
APP-202ENST00000348990 A0A1B0GV72 72 aa13.86□□□□□ -0.19
APP-202ENST00000348990 SCGB2A1O75556 95 aa13.86□□□□□ -0.19
APP-202ENST00000348990 ATP5G2Q06055 141 aa13.86□□□□□ -0.19
APP-202ENST00000348990 ARL17AQ8IVW1 177 aa13.86□□□□□ -0.19
APP-202ENST00000348990 CLUHP3Q96NS8 147 aa13.86□□□□□ -0.19
APP-202ENST00000348990 HIGD1BQ9P298 99 aa13.86□□□□□ -0.19
APP-202ENST00000348990 CUL9Q8IWT3 2517 aa13.86□□□□□ -0.19
APP-202ENST00000348990 ZFHX2Q9C0A1 2572 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms