RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
CXCL12-201ENST00000343575 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-201ENST00000343575 ORM2P19652 201 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 HIST2H2BDQ6DRA6 164 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 OR4X2Q8NGF9 303 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 MAST4O15021 2626 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 CRYBB3P26998 211 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 FAM167A-AS1Q96KT0 104 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 MRPL32Q9BYC8 188 aaKnown RBP11.29□□□□□ -0.6
CXCL12-201ENST00000343575 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
CXCL12-201ENST00000343575 CCL25O15444 150 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 NDUFA7O95182 113 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 IL4P05112 153 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 LYZP61626 148 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 RBX1P62877 108 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
CXCL12-201ENST00000343575 IGHV3OR16-8A0A075B7F1 116 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 COX7A2P2O60397 106 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 HSBP1O75506 76 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 C18orf32Q8TCD1 76 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 RCHY1Q96PM5 261 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.6
CXCL12-201ENST00000343575 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.6
CXCL12-201ENST00000343575 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 ARL3P36405 182 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 JMJD1CQ15652 2540 aa11.27□□□□□ -0.61
CXCL12-201ENST00000343575 UBE2G1P62253 170 aa11.26□□□□□ -0.61
CXCL12-201ENST00000343575 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-201ENST00000343575 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
CXCL12-201ENST00000343575 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
CXCL12-201ENST00000343575 IGLV2-8P01709 118 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 UNQ9165/PRO28630Q6UXU0 137 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-201ENST00000343575 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
CXCL12-201ENST00000343575 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 NTF3P20783 257 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 PROK1P58294 105 aa11.25□□□□□ -0.61
CXCL12-201ENST00000343575 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
CXCL12-201ENST00000343575 H3BRN7 92 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 M0R2Z0 102 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 OR7C2O60412 319 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
CXCL12-201ENST00000343575 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
CXCL12-201ENST00000343575 PET117Q6UWS5 81 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CXCL12-201ENST00000343575 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 CD28P10747 220 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-201ENST00000343575 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-201ENST00000343575 PPBPP02775 128 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 PYYP10082 97 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
CXCL12-201ENST00000343575 TCL1AP56279 114 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 OR4F17Q8NGA8 305 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
CXCL12-201ENST00000343575 TMEM70Q9BUB7 260 aa11.23□□□□□ -0.61
CXCL12-201ENST00000343575 IGHV4OR15-8A0A075B7B6 117 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 A0A087WW49 117 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 NDUFA4O00483 81 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 SPINK4O60575 86 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
CXCL12-201ENST00000343575 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
CXCL12-201ENST00000343575 HAX1O00165 279 aa11.21□□□□□ -0.61
CXCL12-201ENST00000343575 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
CXCL12-201ENST00000343575 APOHP02749 345 aaPredicted RBP11.21□□□□□ -0.61
CXCL12-201ENST00000343575 GP9P14770 177 aa11.21□□□□□ -0.61
CXCL12-201ENST00000343575 SLAQ13239 276 aa11.21□□□□□ -0.61
CXCL12-201ENST00000343575 FXYD5Q96DB9 178 aa11.21□□□□□ -0.61
CXCL12-201ENST00000343575 U3KQE9 123 aa11.21□□□□□ -0.61
CXCL12-201ENST00000343575 TRAV34A0A0B4J273 112 aa11.21□□□□□ -0.62
CXCL12-201ENST00000343575 C2orf70A6NJV1 201 aa11.21□□□□□ -0.62
CXCL12-201ENST00000343575 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.62
CXCL12-201ENST00000343575 OR5AL1P0C617 328 aa11.21□□□□□ -0.62
CXCL12-201ENST00000343575 DEFB136Q30KP8 78 aa11.21□□□□□ -0.62
CXCL12-201ENST00000343575 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.62
CXCL12-201ENST00000343575 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.62
CXCL12-201ENST00000343575 BUB3O43684 328 aa11.2□□□□□ -0.62
CXCL12-201ENST00000343575 IGLL1P15814 213 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms