RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 MS4A6AQ9H2W1 248 aa15.46■□□□□ 0.07
SEMA6C-201ENST00000341697 LGALS1P09382 135 aaKnown RBP15.46■□□□□ 0.07
SEMA6C-201ENST00000341697 ARFGEF3Q5TH69 2177 aa15.46■□□□□ 0.06
SEMA6C-201ENST00000341697 TMEM95Q3KNT9 176 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 SMIM13P0DJ93 91 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 CTAG1AP78358 180 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 FOXE3Q13461 319 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 CDKN1BP46527 198 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 BLCAPP62952 87 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 AMN1Q8IY45 258 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 PRR25Q96S07 402 aa15.45■□□□□ 0.06
SEMA6C-201ENST00000341697 IGLV1-47P01700 117 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 HOXD3P31249 432 aaPredicted RBP15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 Q8N7P7 452 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 CSTL1Q9H114 145 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 FAM231BA6NCW3 169 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 C19orf84I3L1E1 186 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 SSBP2P81877 361 aaPredicted RBP15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 SMPXQ9UHP9 88 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 IGKCP01834 107 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 RITA1Q96K30 269 aa15.44■□□□□ 0.06
SEMA6C-201ENST00000341697 RNASE1P07998 156 aaKnown RBP15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 CT83Q5H943 113 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 ZNF114Q8NC26 417 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 FXYD5Q96DB9 178 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 C9JQL5 133 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 LINC00469Q8N7U9 141 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 IGHV1OR15-1A0A075B7D0 117 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 ADCYAP1P18509 176 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 CYYR1Q96J86 154 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 KLK9Q9UKQ9 250 aa15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 NCOA6Q14686 2063 aaPredicted RBP15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 LSM4Q9Y4Z0 139 aaKnown RBP15.43■□□□□ 0.06
SEMA6C-201ENST00000341697 CCL24O00175 119 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 RHODO00212 210 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 OR5A1Q8NGJ0 315 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 Q8N9W7 124 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 KNCNA6PVL3 124 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 DNAL4O96015 105 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 APOC4P55056 127 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 LAMTOR2Q9Y2Q5 125 aa15.42■□□□□ 0.06
SEMA6C-201ENST00000341697 TRAV9-2A0A087WT02 112 aa15.41■□□□□ 0.06
SEMA6C-201ENST00000341697 DEFB104AQ8WTQ1 72 aa15.41■□□□□ 0.06
SEMA6C-201ENST00000341697 HIST1H2BLQ99880 126 aa15.41■□□□□ 0.06
SEMA6C-201ENST00000341697 SIRPDQ9H106 197 aa15.41■□□□□ 0.06
SEMA6C-201ENST00000341697 VWC2Q2TAL6 325 aa15.41■□□□□ 0.06
SEMA6C-201ENST00000341697 C5orf56Q8N8D9 126 aa15.4■□□□□ 0.06
SEMA6C-201ENST00000341697 OR2K2Q8NGT1 345 aa15.4■□□□□ 0.06
SEMA6C-201ENST00000341697 MRPL16Q9NX20 251 aaKnown RBP15.4■□□□□ 0.06
SEMA6C-201ENST00000341697 ATP6V0BQ99437 205 aa15.4■□□□□ 0.06
SEMA6C-201ENST00000341697 PRSS46E5RG02 174 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 SMKR1H3BMG3 65 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 CBY1Q9Y3M2 126 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 IGLV11-55A0A075B6I3 123 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 A0A1B0GUS0 222 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 TEX43Q6ZNM6 134 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 NCKAP5O14513 1909 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 IGF2RP11717 2491 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 TRAV12-2A0A075B6T6 113 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 UBE2CO00762 179 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 C22orf34Q6ZV56 151 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 PTPN13Q12923 2485 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 I3L2K1 104 aa15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 TRPT1Q86TN4 253 aaKnown RBP15.39■□□□□ 0.05
SEMA6C-201ENST00000341697 DEFB136Q30KP8 78 aa15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 CD300EQ496F6 205 aaPredicted RBP15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 HIST3H2BBQ8N257 126 aa15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 DAD1P61803 113 aa15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 K7EIM0 57 aa15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 ANXA2RQ3ZCQ2 193 aa15.38■□□□□ 0.05
SEMA6C-201ENST00000341697 TMEM213A2RRL7 107 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 PHLDA1Q8WV24 401 aaPredicted RBP15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 CSPG4Q6UVK1 2322 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 LOC102724200A0A096LPH7 203 aaPredicted RBP15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 SEC11AP67812 179 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 FAM231DQ6ZW35 169 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 APOMO95445 188 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 LOXL1Q08397 574 aaPredicted RBP15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 ODF3L1Q8IXM7 274 aa15.37■□□□□ 0.05
SEMA6C-201ENST00000341697 HIVEP2P31629 2446 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 LRRC75A-AS1Q8N1F1 130 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 C11orf52Q96A22 123 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 C1orf159Q96HA4 380 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 A8MWV9 139 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 TNFRSF6BO95407 300 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 ZNF843Q8N446 348 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 TMEM158Q8WZ71 300 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 TRBV7-9A0A0J9YWB2 115 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 FOXI2Q6ZQN5 318 aa15.36■□□□□ 0.05
SEMA6C-201ENST00000341697 RBMY1BA6NDE4 496 aaKnown RBP15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 RBMY1EA6NEQ0 496 aaKnown RBP15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 ZNF815PA8K554 130 aa15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 IGLV2-23P01705 113 aa15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 RBMY1DP0C7P1 496 aaKnown RBP15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 RBMY1A1P0DJD3 496 aaKnown RBP15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 RBMY1CP0DJD4 496 aa15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 AZU1P20160 251 aa15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 LMO4P61968 165 aa15.35■□□□□ 0.05
SEMA6C-201ENST00000341697 TMEM256Q8N2U0 113 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms