RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 IGKV3-7A0A075B6H7 116 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 NDUFS7O75251 213 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 CD3EP07766 207 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 PLP1P60201 277 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 AGRNO00468 2067 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 A6NDN8 102 aa12.61□□□□□ -0.39
SCARB1-202ENST00000339570 SMAD7O15105 426 aaKnown RBP12.61□□□□□ -0.39
SCARB1-202ENST00000339570 CEACAM4O75871 244 aa12.61□□□□□ -0.39
SCARB1-202ENST00000339570 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
SCARB1-202ENST00000339570 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
SCARB1-202ENST00000339570 OR2K2Q8NGT1 345 aa12.61□□□□□ -0.39
SCARB1-202ENST00000339570 FGF6P10767 208 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 LINC00527Q9UJ94 153 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 TNFRSF13BO14836 293 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-202ENST00000339570 MFAP4P55083 255 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 SORL1Q92673 2214 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 PRR25Q96S07 402 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
SCARB1-202ENST00000339570 DOPEY2Q9Y3R5 2298 aa12.6□□□□□ -0.39
SCARB1-202ENST00000339570 APOBEC3AP31941 199 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-202ENST00000339570 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-202ENST00000339570 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
SCARB1-202ENST00000339570 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
SCARB1-202ENST00000339570 FXYD2P54710 66 aa12.59□□□□□ -0.39
SCARB1-202ENST00000339570 IL17RELQ6ZVW7 336 aa12.59□□□□□ -0.39
SCARB1-202ENST00000339570 DPM3Q9P2X0 92 aa12.59□□□□□ -0.39
SCARB1-202ENST00000339570 DYNAPQ8N1N2 210 aa12.58□□□□□ -0.4
SCARB1-202ENST00000339570 VPS13CQ709C8 3753 aa12.58□□□□□ -0.4
SCARB1-202ENST00000339570 C9orf118A6NHY6 69 aa12.58□□□□□ -0.4
SCARB1-202ENST00000339570 TMEM158Q8WZ71 300 aa12.58□□□□□ -0.4
SCARB1-202ENST00000339570 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
SCARB1-202ENST00000339570 DEFB1P60022 68 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 C3orf36Q3SXR2 165 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 IGFL3Q6UXB1 125 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 TRGV3P03979 118 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 PVRIGQ6DKI7 326 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 ARPC1AQ92747 370 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 CSPG4Q6UVK1 2322 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 SEC11AP67812 179 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
SCARB1-202ENST00000339570 NDUFA3O95167 84 aa12.56□□□□□ -0.4
SCARB1-202ENST00000339570 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
SCARB1-202ENST00000339570 ZC2HC1BQ5TFG8 222 aa12.56□□□□□ -0.4
SCARB1-202ENST00000339570 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
SCARB1-202ENST00000339570 TRAV40A0A0B4J280 105 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 EFNA4P52798 201 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
SCARB1-202ENST00000339570 HOXB4P17483 251 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-202ENST00000339570 Q8NA96 180 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 TNFRSF6BO95407 300 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 HSD52Q0P140 79 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
SCARB1-202ENST00000339570 CLEC3BP05452 202 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 LGALS9BQ3B8N2 356 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 RPL7P18124 248 aaKnown RBP12.54□□□□□ -0.4
SCARB1-202ENST00000339570 SAMD5Q5TGI4 173 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 C8orf31Q8N9H6 132 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 CFHR4Q92496 578 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 JKAMPQ9P055 326 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 B9A039 149 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 PPBPP02775 128 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 FABP2P12104 132 aa12.54□□□□□ -0.4
SCARB1-202ENST00000339570 TMEM8BA6NDV4 472 aa12.53□□□□□ -0.4
SCARB1-202ENST00000339570 G3V318 75 aa12.53□□□□□ -0.4
SCARB1-202ENST00000339570 H3BRM9 83 aa12.53□□□□□ -0.4
SCARB1-202ENST00000339570 K7EP34 96 aa12.53□□□□□ -0.4
SCARB1-202ENST00000339570 Q6AWC8 147 aa12.53□□□□□ -0.4
SCARB1-202ENST00000339570 A0A1W2PPM0 123 aa12.52□□□□□ -0.4
SCARB1-202ENST00000339570 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.4
SCARB1-202ENST00000339570 F8W735 103 aaPredicted RBP12.52□□□□□ -0.4
SCARB1-202ENST00000339570 CDSNQ15517 529 aa12.52□□□□□ -0.4
SCARB1-202ENST00000339570 C15orf32Q32M92 178 aa12.52□□□□□ -0.4
SCARB1-202ENST00000339570 ADAMTSL5Q6ZMM2 481 aa12.52□□□□□ -0.4
SCARB1-202ENST00000339570 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 LINC01548A6NM66 108 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 CCL21O00585 134 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 CTSGP08311 255 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 DTX2Q86UW9 622 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
SCARB1-202ENST00000339570 MRPL35Q9NZE8 188 aaKnown RBP12.52□□□□□ -0.41
SCARB1-202ENST00000339570 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 TNFRSF14Q92956 283 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 A0A1B0GW15 77 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 BMI1P35226 326 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
SCARB1-202ENST00000339570 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms