RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 M0R3E3 92 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 IFNA7P01567 189 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 RAB2AP61019 212 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 RANP62826 216 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 TMEM78Q5T7P6 136 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 BAP18Q8IXM2 172 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 RPP25LQ8N5L8 163 aaKnown RBP8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 STOML3Q8TAV4 291 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 RXFP4Q8TDU9 374 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 LYSTQ99698 3801 aa8.16□□□□□ -1.1
SLC28A1-202ENST00000338602 H7BYZ3 331 aa8.15□□□□□ -1.1
SLC28A1-202ENST00000338602 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
SLC28A1-202ENST00000338602 TAS2R60P59551 318 aa8.15□□□□□ -1.1
SLC28A1-202ENST00000338602 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
SLC28A1-202ENST00000338602 C2CD4CQ8TF44 421 aa8.15□□□□□ -1.1
SLC28A1-202ENST00000338602 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 LCE6AA0A183 80 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 SLC25A5P05141 298 aaKnown RBP8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 CT45A10P0DMU9 189 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 PRB4P10163 310 aaPredicted RBP8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 TCTAP57738 103 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 CCDC28AQ8IWP9 274 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 PCNPQ8WW12 178 aaKnown RBP8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 PHYHIPLQ96FC7 376 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 NIPSNAP3BQ9BS92 247 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 Q9H3A6 140 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 HERC2O95714 4834 aa8.14□□□□□ -1.11
SLC28A1-202ENST00000338602 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 HTN1P15515 57 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 ERCC8Q13216 396 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 ZNF493Q6ZR52 646 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 C9orf47Q6ZRZ4 202 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 TMED6Q8WW62 240 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 RAB24Q969Q5 203 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 ZNF503Q96F45 646 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 AGPAT4-IT1Q9H0P7 198 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 SH3BGRL3Q9H299 93 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 OTORQ9NRC9 128 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 YTHDF2Q9Y5A9 579 aaKnown RBP8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 STARD9Q9P2P6 4700 aa8.13□□□□□ -1.11
SLC28A1-202ENST00000338602 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 RBAKDNA6NC62 111 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 PGPA6NDG6 321 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 J3KRW8 73 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 CXorf1O96002 111 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 NMBP08949 121 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 STAG3L2P0CL84 134 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 STAG3L3P0CL85 134 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 ARL14EPLP0DKL9 152 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 ZNF138P52744 262 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 GFI1BQ5VTD9 330 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 Q6ZTC4 211 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 C16orf74Q96GX8 76 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 TMEM167BQ9NRX6 74 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 DKK2Q9UBU2 259 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 CELA1Q9UNI1 258 aa8.12□□□□□ -1.11
SLC28A1-202ENST00000338602 TRBV7-9A0A0J9YWB2 115 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 IGLL5B9A064 214 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 EIF3GO75821 320 aaKnown RBP eCLIP8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 GPX1P07203 203 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 DAD1P61803 113 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 C12orf74Q32Q52 190 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 PYGO2Q9BRQ0 406 aa8.11□□□□□ -1.11
SLC28A1-202ENST00000338602 DEFB131BA0A096LNP1 70 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 C7orf71A4D174 169 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 DIRC3C9JPN6 131 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 SEC11BP0C7V7 166 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 CRISP2P16562 243 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 GCHFRP30047 84 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 RAB14P61106 215 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 EIF5AL1Q6IS14 154 aaKnown RBP8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 TMEM263Q8WUH6 116 aaKnown RBP8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 VGLL1Q99990 258 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 ZNF492Q9P255 531 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 TIMM8BQ9Y5J9 83 aaPredicted RBP8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 LENEPQ9Y5L5 61 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 SERTM2A0A1B0GWG4 89 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 K7EQM0 130 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 AZU1P20160 251 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 KIR3DS1Q14943 382 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 SLC7A5P1Q8MH63 180 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 FAM19A4Q96LR4 140 aa8.1□□□□□ -1.11
SLC28A1-202ENST00000338602 RPH3ALQ9UNE2 315 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms