RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGKV1D-17A0A075B6S4 117 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 WFDC9Q8NEX5 89 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 ZC2HC1AQ96GY0 325 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 IGLV3-12A0A075B6K2 115 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 IGKV1-6A0A0C4DH72 117 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 ZNF672Q499Z4 452 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-201ENST00000334504 MINOS1Q5TGZ0 78 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 MINOS1-NBL1R4GNA1 71 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 COL4A1P02462 1669 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 ATOX1O00244 68 aa7.87□□□□□ -1.15
COL4A6-201ENST00000334504 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-201ENST00000334504 ZNF747Q9BV97 191 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 ORMDL1Q9P0S3 153 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 DOCK4Q8N1I0 1966 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 G3V4G9 280 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 FOXI2Q6ZQN5 318 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 PIP4P2Q8N4L2 257 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 ZNRD1Q9P1U0 126 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 K7EMI3 77 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 RHODO00212 210 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 THAP8Q8NA92 274 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 USMG5Q96IX5 58 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 F6UB75 175 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 WFDC2Q14508 124 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 COL4A5P29400 1685 aa7.86□□□□□ -1.15
COL4A6-201ENST00000334504 TMEM14BQ9NUH8 114 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 RALGAPA1Q6GYQ0 2036 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 MPDZO75970 2070 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 PRR25Q96S07 402 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 SEC16AO15027 2179 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 DEFB131AP59861 70 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 ZNRF2Q8NHG8 242 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 OOSP1A8MZH6 123 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 OVOL3O00110 214 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 HERV-K104P63124 156 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 CR1LQ2VPA4 569 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 BRD3OSQ6XYD6 125 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 ARHGEF17Q96PE2 2063 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-201ENST00000334504 ZNF493Q6ZR52 646 aa7.85□□□□□ -1.15
COL4A6-201ENST00000334504 E9PLN8 166 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 H3BUX3 64 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 PSMB8P28062 276 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 DAZ1Q9NQZ3 744 aaKnown RBP7.84□□□□□ -1.15
COL4A6-201ENST00000334504 LYPD2Q6UXB3 125 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 HERVK_113P63121 156 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 CFHR4Q92496 578 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 NUPR1O60356 82 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 DAD1P61803 113 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 SP5Q6BEB4 398 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-201ENST00000334504 PYGO2Q9BRQ0 406 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 NDUFA4L2Q9NRX3 87 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 PATJQ8NI35 1801 aa7.84□□□□□ -1.15
COL4A6-201ENST00000334504 TNS1Q9HBL0 1735 aaKnown RBP7.83□□□□□ -1.16
COL4A6-201ENST00000334504 PARP14Q460N5 1801 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 Q8NFD4 153 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 DEFB105AQ8NG35 78 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 RNF223E7ERA6 249 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 H3BRN7 92 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 CFPP27918 469 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-201ENST00000334504 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 TRAV12-2A0A075B6T6 113 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 IGKV1-39P01597 117 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 IGKV1D-39P04432 117 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 FOXI1Q12951 378 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 TAX1BP3O14907 124 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 NDUFB8O95169 186 aa7.83□□□□□ -1.16
COL4A6-201ENST00000334504 FAM120AOSQ5T036 256 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 TEX36Q5VZQ5 186 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 C11orf52Q96A22 123 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 C20orf78Q9BR46 151 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 XIRP1Q702N8 1843 aaKnown RBP7.82□□□□□ -1.16
COL4A6-201ENST00000334504 WNK3Q9BYP7 1800 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
COL4A6-201ENST00000334504 LINC00173Q6ZV60 143 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 FXYD5Q96DB9 178 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 Q96MF0 132 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 LOC285556D6RIA3 1793 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 TP53BP1Q12888 1972 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-201ENST00000334504 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 TMEM14CQ9P0S9 112 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 LTAP01374 205 aa7.82□□□□□ -1.16
COL4A6-201ENST00000334504 NYNRINQ9P2P1 1898 aaKnown RBP7.82□□□□□ -1.16
COL4A6-201ENST00000334504 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
COL4A6-201ENST00000334504 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
COL4A6-201ENST00000334504 Q9H8V8 135 aa7.81□□□□□ -1.16
COL4A6-201ENST00000334504 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
COL4A6-201ENST00000334504 FXYD2P54710 66 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 IGHV4-28A0A0C4DH34 117 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms