RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TMEM14CQ9P0S9 112 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 NDUFS7O75251 213 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 CITED1Q99966 193 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 AAMDCQ9H7C9 122 aa10.84□□□□□ -0.67
SYNE3-201ENST00000334258 NPYP01303 97 aa10.83□□□□□ -0.67
SYNE3-201ENST00000334258 IL4P05112 153 aa10.83□□□□□ -0.67
SYNE3-201ENST00000334258 RNF183Q96D59 192 aa10.83□□□□□ -0.67
SYNE3-201ENST00000334258 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.67
SYNE3-201ENST00000334258 HIVEP3Q5T1R4 2406 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 CSMD2Q7Z408 3487 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 OVOL3O00110 214 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 CD40P25942 277 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 ID1P41134 155 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 FXYD2P54710 66 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
SYNE3-201ENST00000334258 K7EMI3 77 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 CELSR1Q9NYQ6 3014 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 MALRD1Q5VYJ5 2156 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 RAI1Q7Z5J4 1906 aaPredicted RBP10.82□□□□□ -0.68
SYNE3-201ENST00000334258 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 Q6ZS92 163 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 SHANK2-AS3Q9BTD1 123 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 B5MCH6 92 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 SH2D1AO60880 128 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 SMIM17P0DL12 118 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
SYNE3-201ENST00000334258 TSPAN13O95857 204 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 FCER1GP30273 86 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 C17orf100A8MU93 164 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 FCN3O75636 299 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 LEPP41159 167 aa10.81□□□□□ -0.68
SYNE3-201ENST00000334258 IGKV2D-26A0A0A0MRZ7 120 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 HOXB4P17483 251 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 GFRALQ6UXV0 394 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 MBD3L2Q8NHZ7 208 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 IGKV2-40A0A087WW87 121 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 NPIPB5A8MRT5 1133 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 CEACAM4O75871 244 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 IGKV2D-40P01614 121 aaPredicted RBP10.8□□□□□ -0.68
SYNE3-201ENST00000334258 IGHV1-8P0DP01 117 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 COX7A1P24310 79 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 LINC00311Q8N616 119 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 MAP1LC3AQ9H492 121 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 ORM1P02763 201 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 EVI2AP22794 236 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 VGLL1Q99990 258 aa10.8□□□□□ -0.68
SYNE3-201ENST00000334258 J3QR89 54 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 GATD1Q8NB37 220 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 TRBV6-1A0A0K0K1D8 114 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 MTURNQ8N3F0 131 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 Q8NA96 180 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 Q8TAT8 98 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 FOXC2Q99958 501 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 FAM208BQ5VWN6 2430 aa10.79□□□□□ -0.68
SYNE3-201ENST00000334258 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 TMEM178BH3BS89 294 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 I3L2K1 104 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
SYNE3-201ENST00000334258 TMEM160Q9NX00 188 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 LOXP28300 417 aaPredicted RBP10.78□□□□□ -0.68
SYNE3-201ENST00000334258 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 RPEQ96AT9 228 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 U3KQK5 164 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
SYNE3-201ENST00000334258 H3BRN7 92 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 WFDC2Q14508 124 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
SYNE3-201ENST00000334258 PF4V1P10720 104 aa10.77□□□□□ -0.68
SYNE3-201ENST00000334258 EGR2P11161 476 aaPredicted RBP10.77□□□□□ -0.68
SYNE3-201ENST00000334258 ZC2HC1BQ5TFG8 222 aa10.77□□□□□ -0.68
SYNE3-201ENST00000334258 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
SYNE3-201ENST00000334258 IGKCP01834 107 aa10.77□□□□□ -0.69
SYNE3-201ENST00000334258 PPIFP30405 207 aaKnown RBP10.77□□□□□ -0.69
SYNE3-201ENST00000334258 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
SYNE3-201ENST00000334258 IGFL4Q6B9Z1 124 aa10.77□□□□□ -0.69
SYNE3-201ENST00000334258 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.69
SYNE3-201ENST00000334258 IGHV1-3A0A0C4DH29 117 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 MRPL16Q9NX20 251 aaKnown RBP10.76□□□□□ -0.69
SYNE3-201ENST00000334258 TMEM155Q4W5P6 130 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 PVRIGQ6DKI7 326 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 A0A0G2JNJ9 132 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 H3BMG7 143 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 INSL3P51460 131 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 LY6DQ14210 128 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms