RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PRSS22Q9GZN4 317 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 SEC11AP67812 179 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 K7EP34 96 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 FCN3O75636 299 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
PABPC1-201ENST00000318607 RNF125Q96EQ8 232 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 A4D1N5 150 aa11.21□□□□□ -0.61
PABPC1-201ENST00000318607 H3BVH4 76 aa11.21□□□□□ -0.61
PABPC1-201ENST00000318607 NDUFS7O75251 213 aa11.21□□□□□ -0.61
PABPC1-201ENST00000318607 ZNF833PQ6ZTB9 187 aa11.21□□□□□ -0.61
PABPC1-201ENST00000318607 SIGLEC9Q9Y336 463 aa11.21□□□□□ -0.61
PABPC1-201ENST00000318607 C17orf100A8MU93 164 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 IGKV1-17P01599 117 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 INSL3P51460 131 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 Q6ZQT7 251 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 SS18L2Q9UHA2 77 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 TIMM23O14925 209 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 POU2AF1Q16633 256 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 TMEM158Q8WZ71 300 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 ZNF479Q96JC4 524 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 LINC00527Q9UJ94 153 aa11.21□□□□□ -0.62
PABPC1-201ENST00000318607 IGLV2-23P01705 113 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 EGR2P11161 476 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-201ENST00000318607 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 A0A1B0GWB2 263 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 DEFB1P60022 68 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 HSD52Q0P140 79 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
PABPC1-201ENST00000318607 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-201ENST00000318607 HAX1O00165 279 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 A0A096LNJ9 63 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 TMEM8BA6NDV4 472 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-201ENST00000318607 APOMO95445 188 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 IGHV1-8P0DP01 117 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 CHAC1Q9BUX1 264 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 FSTL3O95633 263 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 IGLV2-11P01706 119 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 MYCNOSP40205 109 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-201ENST00000318607 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
PABPC1-201ENST00000318607 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 H3BRM9 83 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 G3V4G9 280 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 TRGV9Q99603 122 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 M0R381 172 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 LINC01560Q8TB33 94 aa11.18□□□□□ -0.62
PABPC1-201ENST00000318607 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-201ENST00000318607 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 C1orf162Q8NEQ5 155 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-201ENST00000318607 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
PABPC1-201ENST00000318607 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 C16orf97H3BN30 126 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 TM4SF5O14894 197 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 SIVA1O15304 175 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 GLMPQ8WWB7 406 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 ZNF883P0CG24 379 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 RAB9AP51151 201 aa11.17□□□□□ -0.62
PABPC1-201ENST00000318607 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-201ENST00000318607 A0A1B0GV72 72 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 NDPQ00604 133 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 THAP8Q8NA92 274 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 VKORC1Q9BQB6 163 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 TMEM178BH3BS89 294 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 PTH2Q96A98 100 aa11.16□□□□□ -0.62
PABPC1-201ENST00000318607 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-201ENST00000318607 RAI1Q7Z5J4 1906 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-201ENST00000318607 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 MGPP08493 103 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 FGF6P10767 208 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 LGALS7P47929 136 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
PABPC1-201ENST00000318607 SPANXN1Q5VSR9 72 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 SIGLEC15Q6ZMC9 328 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 SIGMAR1Q99720 223 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 ZNF492Q9P255 531 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 IGHG3P01860 377 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 ACACBO00763 2458 aa11.15□□□□□ -0.62
PABPC1-201ENST00000318607 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.63
PABPC1-201ENST00000318607 FAM90A27PA6NNH2 459 aa11.15□□□□□ -0.63
PABPC1-201ENST00000318607 TRGV3P03979 118 aa11.15□□□□□ -0.63
PABPC1-201ENST00000318607 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
PABPC1-201ENST00000318607 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms