RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 DIDO1Q9BTC0 2240 aaKnown RBP5.21□□□□□ -1.57
ZNF540-201ENST00000316433 NCBP2LA6PVI3 153 aaKnown RBP5.21□□□□□ -1.58
ZNF540-201ENST00000316433 OVOL3O00110 214 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 OXTP01178 125 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 CRYGAP11844 174 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 CNTFRP26992 372 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 RPL13AP40429 203 aaKnown RBP5.21□□□□□ -1.58
ZNF540-201ENST00000316433 C17orf58Q2M2W7 97 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 AMN1Q8IY45 258 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 TMEM167AQ8TBQ9 72 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 RNF5Q99942 180 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 D6R8Y8 96 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 PATE4P0C8F1 98 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 CCL11P51671 97 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 ZNF415Q09FC8 603 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 EBI3Q14213 229 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 CD177Q8N6Q3 437 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 ITLN1Q8WWA0 313 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 IMUPQ9GZP8 106 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 NDUFA4L2Q9NRX3 87 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 SIT1Q9Y3P8 196 aa5.21□□□□□ -1.58
ZNF540-201ENST00000316433 LGALS9O00182 355 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 PRSS1P07477 247 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 LGALS1P09382 135 aaKnown RBP5.2□□□□□ -1.58
ZNF540-201ENST00000316433 ARMS2P0C7Q2 107 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 COX7CP15954 63 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 CD69Q07108 199 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 CEMP1Q6PRD7 247 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-201ENST00000316433 LYPD1Q8N2G4 141 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 UBALD1Q8TB05 177 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 PKIGQ9Y2B9 76 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 RTTNQ86VV8 2226 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 CACNA1GO43497 2377 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 ATP5G1P05496 136 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 RNASE2P10153 161 aaKnown RBP5.2□□□□□ -1.58
ZNF540-201ENST00000316433 CCL4P13236 92 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 DTX2Q86UW9 622 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 ZCCHC24Q8N2G6 241 aaKnown RBP5.2□□□□□ -1.58
ZNF540-201ENST00000316433 MYOZ3Q8TDC0 251 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 FOXC2Q99958 501 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 MRPL20Q9BYC9 149 aaKnown RBP5.2□□□□□ -1.58
ZNF540-201ENST00000316433 SPRR3Q9UBC9 169 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 U3KQK5 164 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 IGKV1D-17A0A075B6S4 117 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 TEX49A0A1B0GTD5 131 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 PRDX2P32119 198 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 TMEM258P61165 79 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 IGFL3Q6UXB1 125 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 FMC1Q96HJ9 113 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 S1PR3Q99500 378 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 LINC00527Q9UJ94 153 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 SLC25A15Q9Y619 301 aa5.2□□□□□ -1.58
ZNF540-201ENST00000316433 ABCA7Q8IZY2 2146 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 TRGV5A0A0B4J1U4 118 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 TRAV40A0A0B4J280 105 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 TRACP01848 142 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 CRIP2P52943 208 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-201ENST00000316433 ORMDL3Q8N138 153 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 FSCN3Q9NQT6 498 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 KAAG1Q9UBP8 84 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 RPUSD1Q9UJJ7 312 aaKnown RBP5.19□□□□□ -1.58
ZNF540-201ENST00000316433 FAM240AA0A1B0GVK7 77 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 H3BMM0 161 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 MAGEA5P43359 124 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 NDUFA11Q86Y39 141 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 TMEM86BQ8N661 226 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 UBE2WQ96B02 151 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 PYGO1Q9Y3Y4 419 aa5.19□□□□□ -1.58
ZNF540-201ENST00000316433 TET2Q6N021 2002 aaPredicted RBP5.18□□□□□ -1.58
ZNF540-201ENST00000316433 CACNA1DQ01668 2161 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 MRPS12O15235 138 aaKnown RBP5.18□□□□□ -1.58
ZNF540-201ENST00000316433 PYYP10082 97 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 ZNF71Q9NQZ8 489 aaPredicted RBP5.18□□□□□ -1.58
ZNF540-201ENST00000316433 SDK2Q58EX2 2172 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 UNC13CQ8NB66 2214 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 K7ENP7 123 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 TIMM8AO60220 97 aaPredicted RBP5.18□□□□□ -1.58
ZNF540-201ENST00000316433 LINC01600Q96MT4 127 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 PAXXQ9BUH6 204 aa5.18□□□□□ -1.58
ZNF540-201ENST00000316433 ZNF256Q9Y2P7 627 aaPredicted RBP5.18□□□□□ -1.58
ZNF540-201ENST00000316433 hADV29S1A0JD25 119 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 MORN5Q5VZ52 161 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 DSCR8Q96T75 97 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 MRPL35Q9NZE8 188 aaKnown RBP5.17□□□□□ -1.58
ZNF540-201ENST00000316433 SUB1P53999 127 aaKnown RBP eCLIP5.17□□□□□ -1.58
ZNF540-201ENST00000316433 DEFB119Q8N690 84 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 FXYD5Q96DB9 178 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 FAM19A4Q96LR4 140 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 PSMG3-AS1Q96PY0 264 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 ESPL1Q14674 2120 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 IGHV1-18A0A0C4DH31 117 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 LEPP41159 167 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 FAM104BQ5XKR9 115 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 C2orf48Q96LS8 159 aa5.17□□□□□ -1.58
ZNF540-201ENST00000316433 USP34Q70CQ2 3546 aa5.16□□□□□ -1.58
ZNF540-201ENST00000316433 DOCK10Q96BY6 2186 aa5.16□□□□□ -1.58
ZNF540-201ENST00000316433 IGKV1D-37A0A075B6S9 117 aa5.16□□□□□ -1.58
ZNF540-201ENST00000316433 A0A096LPE4 126 aa5.16□□□□□ -1.58
ZNF540-201ENST00000316433 TRAV17A0A0B4J275 112 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms