RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 LYPD1Q8N2G4 141 aa11.5□□□□□ -0.57
COL6A2-202ENST00000310645 ZNF479Q96JC4 524 aa11.5□□□□□ -0.57
COL6A2-202ENST00000310645 ACACAQ13085 2346 aa11.5□□□□□ -0.57
COL6A2-202ENST00000310645 PRR25Q96S07 402 aa11.49□□□□□ -0.57
COL6A2-202ENST00000310645 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
COL6A2-202ENST00000310645 CEND1Q8N111 149 aa11.48□□□□□ -0.57
COL6A2-202ENST00000310645 CD300EQ496F6 205 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-202ENST00000310645 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
COL6A2-202ENST00000310645 IGLL5B9A064 214 aa11.48□□□□□ -0.57
COL6A2-202ENST00000310645 J3QR89 54 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
COL6A2-202ENST00000310645 DPM2O94777 84 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 WFDC12Q8WWY7 111 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
COL6A2-202ENST00000310645 BUB1B-PAK6H3BSN5 160 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 NDUFA3O95167 84 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 PHLDA1Q8WV24 401 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-202ENST00000310645 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 SPANXB1Q9NS25 103 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-202ENST00000310645 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 INSL3P51460 131 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 ERCC8Q13216 396 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 RNF185Q96GF1 192 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
COL6A2-202ENST00000310645 ATMQ13315 3056 aa11.46□□□□□ -0.57
COL6A2-202ENST00000310645 ATP5G2Q06055 141 aa11.46□□□□□ -0.57
COL6A2-202ENST00000310645 HES1Q14469 280 aa11.46□□□□□ -0.57
COL6A2-202ENST00000310645 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
COL6A2-202ENST00000310645 C8orf31Q8N9H6 132 aa11.46□□□□□ -0.57
COL6A2-202ENST00000310645 SPAG8Q99932 426 aaPredicted RBP11.46□□□□□ -0.57
COL6A2-202ENST00000310645 TIMM23O14925 209 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 BMI1P35226 326 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 IGFL2Q6UWQ7 119 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 HIGD1BQ9P298 99 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 SPAARA0A1B0GVQ0 90 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 IGLV1-47P01700 117 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 ASCL5Q7RTU5 278 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 DEFB123Q8N688 67 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
COL6A2-202ENST00000310645 E9PLD3 99 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
COL6A2-202ENST00000310645 SPTBN1Q01082 2364 aaKnown RBP11.44□□□□□ -0.58
COL6A2-202ENST00000310645 A0A1B0GV72 72 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 CEACAM4O75871 244 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 C3orf36Q3SXR2 165 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 GAGE13Q4V321 117 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
COL6A2-202ENST00000310645 RNASE6Q93091 150 aaKnown RBP11.44□□□□□ -0.58
COL6A2-202ENST00000310645 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 F8W1H4 67 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 IGLC6P0CF74 106 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 EFNA4P52798 201 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 DTX2Q86UW9 622 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 MYOZ3Q8TDC0 251 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 ONECUT1Q9UBC0 465 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 RALYQ9UKM9 306 aaKnown RBP11.43□□□□□ -0.58
COL6A2-202ENST00000310645 IGHV3OR16-13A0A075B7E8 117 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 IGHV3-74A0A0B4J1X5 117 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 PRRG2O14669 202 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 ATP6V0BQ99437 205 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
COL6A2-202ENST00000310645 PDE6HQ13956 83 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 IGHV3-66A0A0C4DH42 116 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
COL6A2-202ENST00000310645 MFAP4P55083 255 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 ZFHX2Q9C0A1 2572 aaPredicted RBP11.42□□□□□ -0.58
COL6A2-202ENST00000310645 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 TRGV3P03979 118 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
COL6A2-202ENST00000310645 RAB9AP51151 201 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
COL6A2-202ENST00000310645 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 ATP5LO75964 103 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 CYSLTR1Q9Y271 337 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 CUL9Q8IWT3 2517 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 CEACAM3P40198 252 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 CKS1BP61024 79 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 DYNAPQ8N1N2 210 aa11.41□□□□□ -0.58
COL6A2-202ENST00000310645 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 NCBP2LA6PVI3 153 aaKnown RBP11.4□□□□□ -0.58
COL6A2-202ENST00000310645 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 DEFB124Q8NES8 71 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
COL6A2-202ENST00000310645 VSTM5A8MXK1 200 aa11.4□□□□□ -0.59
COL6A2-202ENST00000310645 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.59
COL6A2-202ENST00000310645 PIFOQ8TCI5 191 aa11.4□□□□□ -0.59
COL6A2-202ENST00000310645 NDUFS8O00217 210 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 NBR2O15453 112 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 THBDP07204 575 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms