RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 M0QZK8 103 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 C3orf79P0CE67 100 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 ZNF705DP0CH99 300 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-201ENST00000307767 ZNF705BP0CI00 300 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-201ENST00000307767 DEFB112Q30KQ8 113 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 KRTDAPP60985 99 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 DEFA6Q01524 100 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 IGHV3-11P01762 117 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 RIGQ13278 110 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 USMG5Q96IX5 58 aa12.61□□□□□ -0.39
TVP23B-201ENST00000307767 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 NTF3P20783 257 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 Q6AWC8 147 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 EBLN2Q6P2I7 272 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 PTPN13Q12923 2485 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 NDUFA4O00483 81 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 FSHBP01225 129 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 RNASEKQ6P5S7 137 aaKnown RBP12.6□□□□□ -0.39
TVP23B-201ENST00000307767 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 NDUFAF3Q9BU61 184 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 EPG5Q9HCE0 2579 aa12.6□□□□□ -0.39
TVP23B-201ENST00000307767 ZANQ9Y493 2812 aa12.59□□□□□ -0.39
TVP23B-201ENST00000307767 HSBP1O75506 76 aa12.59□□□□□ -0.39
TVP23B-201ENST00000307767 C20orf173Q96LM9 149 aa12.59□□□□□ -0.39
TVP23B-201ENST00000307767 C2orf70A6NJV1 201 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 PF4V1P10720 104 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 CTRLP40313 264 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 SRSF2Q01130 221 aaKnown RBP12.58□□□□□ -0.39
TVP23B-201ENST00000307767 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.39
TVP23B-201ENST00000307767 TPPP3Q9BW30 176 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 ZNF580Q9UK33 172 aa12.58□□□□□ -0.39
TVP23B-201ENST00000307767 A0A1B0GW15 77 aa12.58□□□□□ -0.4
TVP23B-201ENST00000307767 FAM181BA6NEQ2 426 aa12.58□□□□□ -0.4
TVP23B-201ENST00000307767 SOCS3O14543 225 aa12.58□□□□□ -0.4
TVP23B-201ENST00000307767 ZNF138P52744 262 aa12.58□□□□□ -0.4
TVP23B-201ENST00000307767 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.4
TVP23B-201ENST00000307767 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
TVP23B-201ENST00000307767 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 TGFAP01135 160 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 BMI1P35226 326 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 PMCHL1Q16048 86 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 C20orf144Q9BQM9 153 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 J3QLI3 93 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 C10orf99Q6UWK7 81 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 Q6ZQT7 251 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
TVP23B-201ENST00000307767 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
TVP23B-201ENST00000307767 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
TVP23B-201ENST00000307767 M0R2Z0 102 aa12.56□□□□□ -0.4
TVP23B-201ENST00000307767 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
TVP23B-201ENST00000307767 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
TVP23B-201ENST00000307767 U3KQK5 164 aa12.56□□□□□ -0.4
TVP23B-201ENST00000307767 CENPEQ02224 2701 aa12.56□□□□□ -0.4
TVP23B-201ENST00000307767 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 LINC00614P0C842 121 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 LINC01559Q495D7 138 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 EDN2P20800 178 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 PSMB8P28062 276 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 RPS20P60866 119 aaKnown RBP12.55□□□□□ -0.4
TVP23B-201ENST00000307767 SSTP61278 116 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
TVP23B-201ENST00000307767 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
TVP23B-201ENST00000307767 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
TVP23B-201ENST00000307767 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
TVP23B-201ENST00000307767 PRR9Q5T870 116 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 NPFFR1Q9GZQ6 430 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 ORM1P02763 201 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 DEFB1P60022 68 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 TM4SF20Q53R12 229 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 C9orf139Q6ZV77 190 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
TVP23B-201ENST00000307767 CR1P17927 2039 aa12.52□□□□□ -0.4
TVP23B-201ENST00000307767 A0A0G2JLM5 398 aa12.52□□□□□ -0.4
TVP23B-201ENST00000307767 DEFB113Q30KQ7 82 aa12.52□□□□□ -0.4
TVP23B-201ENST00000307767 VAMP8Q9BV40 100 aa12.52□□□□□ -0.4
TVP23B-201ENST00000307767 MRPL51Q4U2R6 128 aaKnown RBP12.52□□□□□ -0.41
TVP23B-201ENST00000307767 ABCA12Q86UK0 2595 aa12.51□□□□□ -0.41
TVP23B-201ENST00000307767 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
TVP23B-201ENST00000307767 CSN3P07498 182 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms