RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
USP42-201ENST00000306177 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
USP42-201ENST00000306177 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
USP42-201ENST00000306177 C8orf86Q6ZUL3 223 aa12.72□□□□□ -0.37
USP42-201ENST00000306177 ATXN8Q156A1 80 aa12.71□□□□□ -0.37
USP42-201ENST00000306177 HAPLN4Q86UW8 402 aa12.71□□□□□ -0.37
USP42-201ENST00000306177 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
USP42-201ENST00000306177 CENPFP49454 3210 aa12.71□□□□□ -0.37
USP42-201ENST00000306177 THAP8Q8NA92 274 aa12.71□□□□□ -0.38
USP42-201ENST00000306177 CR1LQ2VPA4 569 aa12.71□□□□□ -0.38
USP42-201ENST00000306177 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.38
USP42-201ENST00000306177 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.38
USP42-201ENST00000306177 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.38
USP42-201ENST00000306177 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.38
USP42-201ENST00000306177 NPC2P61916 151 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 RHODO00212 210 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 A0A087X0K7 114 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 C18orf32Q8TCD1 76 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 PAX4O43316 350 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
USP42-201ENST00000306177 IGLC1P0CG04 106 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 PRR25Q96S07 402 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 JPT2Q9H910 190 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 NDUFS6O75380 124 aaKnown RBP12.69□□□□□ -0.38
USP42-201ENST00000306177 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 TIMM21Q9BVV7 248 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 XCL2Q9UBD3 114 aa12.69□□□□□ -0.38
USP42-201ENST00000306177 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 DEFB121Q5J5C9 76 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 C2orf16Q68DN1 1984 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 V9GYV3 84 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
USP42-201ENST00000306177 CST9LQ9H4G1 147 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 ACACBO00763 2458 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 TRAV8-4A0A0B4J246 113 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 IL15RAQ13261 267 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 ZNF664Q8N3J9 261 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
USP42-201ENST00000306177 C22orf46C9J442 243 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 IGHV2-70P01814 119 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 IGHV1OR15-1A0A075B7D0 117 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
USP42-201ENST00000306177 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
USP42-201ENST00000306177 MRPL52Q86TS9 123 aaKnown RBP12.66□□□□□ -0.38
USP42-201ENST00000306177 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 NAA38Q9BRA0 125 aaKnown RBP12.66□□□□□ -0.38
USP42-201ENST00000306177 CTSZQ9UBR2 303 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 Q8N8P6 123 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 FXYD5Q96DB9 178 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 SPXQ9BT56 116 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 C10orf91Q5T1B1 145 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 C11orf52Q96A22 123 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 SMIM27A0A1W2PRY6 76 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 ESDP10768 282 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 PRR20EP86478 221 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 PRR20CP86479 221 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 PRR20DP86480 221 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 PRR20BP86481 221 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 PRR20AP86496 221 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 SS18Q15532 418 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 KRTAP27-1Q3LI81 207 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
USP42-201ENST00000306177 IGHV2-5P01817 119 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 TP53TG1Q9Y2A0 90 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 CDKN1BP46527 198 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 GATD1Q8NB37 220 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 A0A1W2PNU3 283 aaPredicted RBP12.65□□□□□ -0.38
USP42-201ENST00000306177 A8MWP6 167 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 C2orf66Q6UXQ4 117 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
USP42-201ENST00000306177 J3QKU1 62 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 TMEM141Q96I45 108 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 FGF23Q9GZV9 251 aaPredicted RBP12.64□□□□□ -0.39
USP42-201ENST00000306177 H3BUA1 57 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 ELANEP08246 267 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 HOXB4P17483 251 aaPredicted RBP12.64□□□□□ -0.39
USP42-201ENST00000306177 ARFGEF3Q5TH69 2177 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 LHBP01229 141 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 ANXA2RQ3ZCQ2 193 aa12.64□□□□□ -0.39
USP42-201ENST00000306177 A0A1B0GUS0 222 aa12.63□□□□□ -0.39
USP42-201ENST00000306177 LEPROTO15243 131 aa12.63□□□□□ -0.39
USP42-201ENST00000306177 MRPL51Q4U2R6 128 aaKnown RBP12.63□□□□□ -0.39
USP42-201ENST00000306177 Q6ZSR3 168 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms