RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 H3BMG7 143 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 FCN3O75636 299 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 PHLDA1Q8WV24 401 aaPredicted RBP13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 MRPL35Q9NZE8 188 aaKnown RBP13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 ZNF415Q09FC8 603 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 PMVKQ15126 192 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 ZNRD1Q9P1U0 126 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 LYPD2Q6UXB3 125 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 Q6ZVH6 145 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 PRR25Q96S07 402 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 ZNF833PQ6ZTB9 187 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
SNAPC4-201ENST00000298532 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 DNAJC30Q96LL9 226 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 SPANXDQ9BXN6 97 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 JPT2Q9H910 190 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 PKDREJQ9NTG1 2253 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 NPYP01303 97 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 F8VRH5 84 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
SNAPC4-201ENST00000298532 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 Q8NFD4 153 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 C15orf65H3BRN8 121 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 HLA-DRB4P13762 266 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 HLA-DRB4X5D2U9 266 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 CEACAM8P31997 349 aaPredicted RBP13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 WT1-ASQ06250 92 aa13.18□□□□□ -0.3
SNAPC4-201ENST00000298532 DOCK10Q96BY6 2186 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 FAM223BA6NKX1 122 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 IFITM1P13164 125 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 FAM223AQ8IWN6 122 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 C1orf159Q96HA4 380 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 PRO1854Q9UHT4 67 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 CREBBPQ92793 2442 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 K7ERJ3 54 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 ZC2HC1AQ96GY0 325 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 NDUFS7O75251 213 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 C17orf58Q2M2W7 97 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 LAMTOR3Q9UHA4 124 aa13.17□□□□□ -0.3
SNAPC4-201ENST00000298532 NUPR1O60356 82 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 FGF6P10767 208 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 GATA4P43694 442 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 CADP27708 2225 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 Q6ZR03 302 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 H3BRN7 92 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 POU2AF1Q16633 256 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 IL17RELQ6ZVW7 336 aa13.16□□□□□ -0.3
SNAPC4-201ENST00000298532 LTAP01374 205 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 SMIM2Q9BVW6 85 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 PROK2Q9HC23 129 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 DOCK8Q8NF50 2099 aa13.15□□□□□ -0.3
SNAPC4-201ENST00000298532 K7EM74 188 aa13.15□□□□□ -0.31
SNAPC4-201ENST00000298532 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.31
SNAPC4-201ENST00000298532 HTN3P15516 51 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 GATA3P23771 443 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 TDRG1Q3Y452 100 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 Q8TCH9 128 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 KIAA1671Q9BY89 1806 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 A0A1W2PRX2 142 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 DTX2Q86UW9 622 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 DPH3Q96FX2 82 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
SNAPC4-201ENST00000298532 ZNF134P52741 427 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 ASPHD1Q5U4P2 390 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 ZNF625Q96I27 306 aaPredicted RBP13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 SPTAN1Q13813 2472 aaKnown RBP13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 SHANK1Q9Y566 2161 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 LYPD6Q86Y78 171 aa13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 FAM110DQ8TAY7 271 aaPredicted RBP13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 DAZ1Q9NQZ3 744 aaKnown RBP13.13□□□□□ -0.31
SNAPC4-201ENST00000298532 HLA-DMBP28068 263 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 A0A087WX48 190 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 DOCK7Q96N67 2140 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 UTF1Q5T230 341 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms