RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FAM60AQ9NP50 221 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 SCRT2Q9NQ03 307 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 CD59P13987 128 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 LINC00114Q6XXX2 140 aa3.96□□□□□ -1.78
CSMD3-201ENST00000297405 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 WNT2P09544 360 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 VEGFBP49765 207 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CR1LQ2VPA4 569 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 MINOS1Q5TGZ0 78 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 MINOS1-NBL1R4GNA1 71 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 FBXL7Q9UJT9 491 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CCL4L1Q8NHW4 92 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 KLF14Q8TD94 323 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 FAM223BA6NKX1 122 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CCL4P13236 92 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CCL11P51671 97 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 COL9A2Q14055 689 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 FAM223AQ8IWN6 122 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 RNASE8Q8TDE3 154 aaKnown RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 NOTCH1P46531 2555 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 A0A0J9YW62 118 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 INSP01308 110 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CTSBP07858 339 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 ZCCHC24Q8N2G6 241 aaKnown RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 M0QXV9 152 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 AGFG2O95081 481 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 RNASE4P34096 147 aaKnown RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 TMEM14BQ9NUH8 114 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 NEU4Q8WWR8 484 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-201ENST00000297405 RETNQ9HD89 108 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CRLF1O75462 422 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CELA3AP09093 270 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 MST1P26927 711 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 PAX9P55771 341 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 V9GYV3 84 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 PMS2CLQ68D20 193 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 DAND5Q8N907 189 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 CFHR4Q92496 578 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
CSMD3-201ENST00000297405 COL11A2P13942 1736 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-201ENST00000297405 MUC7Q8TAX7 377 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 CRYGBP07316 175 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 Q86TA4 180 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 FDCSPQ8NFU4 85 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 RMI2Q96E14 147 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 GTSF1Q8WW33 167 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV3OR15-7A0A075B7D8 119 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV1OR21-1A0A087WYE8 117 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 F5H768 121 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 INS-IGF2F8WCM5 200 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 PTCRAQ6ISU1 281 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-201ENST00000297405 SLC25A29Q8N8R3 303 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 LINC01619G3V211 115 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 P0DMU3 169 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 FAM231AP0DMU4 169 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 FAM231CP0DMU5 169 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 WFDC9Q8NEX5 89 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 TM2D2Q9BX73 214 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 CCL26Q9Y258 94 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 C12orf77C9JDV5 145 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 TRAV40A0A0B4J280 105 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 SDHAF1A6NFY7 115 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 FAM90A27PA6NNH2 459 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 COX7CP15954 63 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 PCOLCEQ15113 449 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 LDLRAD1Q5T700 205 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
CSMD3-201ENST00000297405 LYZL1Q6UWQ5 148 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 NRACQ8N912 160 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 ZC2HC1AQ96GY0 325 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 SRXN1Q9BYN0 137 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 ELANEP08246 267 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 TMEM196Q5HYL7 178 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 Q8N1Y9 231 aa3.94□□□□□ -1.78
CSMD3-201ENST00000297405 A0A0A6YYD4 124 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 TRGV3P03979 118 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 FAM201AQ5SY85 155 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 KLHDC9Q8NEP7 349 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 ZNF747Q9BV97 191 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 TRAV25A0A0B4J276 109 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 NDUFS5O43920 106 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 Q6P435 159 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV1-45A0A0A0MS14 117 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 IGLL5B9A064 214 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 BMPERQ8N8U9 685 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 DEFB127Q9H1M4 99 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 PAX8Q06710 450 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 CCL14Q16627 93 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 FAM182BQ5T319 152 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 CT62P0C5K7 136 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 IGLV3-21P80748 117 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms