RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 ZC2HC1AQ96GY0 325 aa10.1□□□□□ -0.79
PPP1CB-201ENST00000296122 VGLL1Q99990 258 aa10.1□□□□□ -0.79
PPP1CB-201ENST00000296122 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 ERCC8Q13216 396 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 CRYBG3Q68DQ2 2970 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 MTORP42345 2549 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 ATP5L2Q7Z4Y8 100 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 C8orf49Q96NF6 230 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
PPP1CB-201ENST00000296122 A0A1B0GUT8 65 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 LINC01619G3V211 115 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 FABP4P15090 132 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 PRDM13Q9H4Q3 707 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 UTP20O75691 2785 aaKnown RBP10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 CFHR3Q02985 330 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 SH2D1AO60880 128 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 GZMBP10144 247 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 OR11H1Q8NG94 326 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 GFRA4Q9GZZ7 299 aa10.08□□□□□ -0.8
PPP1CB-201ENST00000296122 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 A0A087WW49 117 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 GPX1P07203 203 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 HOXA5P20719 270 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 OR1N2Q8NGR9 330 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 U3KQE9 123 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 UBE2CO00762 179 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 Q6ZSV7 163 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 OR10D4PQ8NGN7 298 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
PPP1CB-201ENST00000296122 TIMM8BQ9Y5J9 83 aaPredicted RBP10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 CR1P17927 2039 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 PCP4L1A6NKN8 68 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 ZNF688P0C7X2 276 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 SRIP30626 198 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 DEFB136Q30KP8 78 aa10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 Q71RC1 249 aaPredicted RBP10.06□□□□□ -0.8
PPP1CB-201ENST00000296122 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 FER1L6-AS1Q8NA97 138 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 PRAC2D3DTV9 90 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
PPP1CB-201ENST00000296122 A0A1B0GW15 77 aa10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 TCTEX1D4Q5JR98 221 aa10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 LINC00322Q6ZN03 302 aaPredicted RBP10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 C12orf57Q99622 126 aa10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 ZNF705DP0CH99 300 aaPredicted RBP10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 ZNF705BP0CI00 300 aaPredicted RBP10.04□□□□□ -0.8
PPP1CB-201ENST00000296122 HSBP1O75506 76 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 TWIST1Q15672 202 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 OR8A1Q8NGG7 326 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 SSBP4Q9BWG4 385 aaPredicted RBP10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 SLURP1P55000 103 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 C4orf3Q8WVX3 66 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 TRAV21A0A0B4J279 112 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 REC114Q7Z4M0 266 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
PPP1CB-201ENST00000296122 IGKV3-20P01619 116 aa10.02□□□□□ -0.8
PPP1CB-201ENST00000296122 CD33P20138 364 aa10.02□□□□□ -0.8
PPP1CB-201ENST00000296122 NTF3P20783 257 aa10.02□□□□□ -0.8
PPP1CB-201ENST00000296122 TSPOP30536 169 aa10.02□□□□□ -0.8
PPP1CB-201ENST00000296122 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.8
PPP1CB-201ENST00000296122 UNC79Q9P2D8 2635 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 C2orf70A6NJV1 201 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 LGALS9O00182 355 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 S100A12P80511 92 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 Q8N2B8 174 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 TMEM213A2RRL7 107 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 SMIM6P0DI80 62 aa10.02□□□□□ -0.81
PPP1CB-201ENST00000296122 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 LY6G6DO95868 133 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 RNASE4P34096 147 aaKnown RBP10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 GFI1BQ5VTD9 330 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 MS4A6AQ9H2W1 248 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 CELSR2Q9HCU4 2923 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 TRAV8-2A0A0B4J237 113 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 MUC21A0A0G2JKD1 596 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
PPP1CB-201ENST00000296122 PMCHP20382 165 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms