RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TRGV1A0A0A0MS02 117 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 ZNF503-AS2A6NEH8 195 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 HIST1H4AP62805 103 aaKnown RBP13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 DENND4AQ7Z401 1863 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 K7ERJ3 54 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 PDE6HQ13956 83 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 IGHG3P01860 377 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 S100A7L2Q5SY68 101 aa13.22□□□□□ -0.29
SH3RF1-201ENST00000284637 PRSS47A8MTI9 375 aa13.21□□□□□ -0.29
SH3RF1-201ENST00000284637 PROK2Q9HC23 129 aa13.21□□□□□ -0.29
SH3RF1-201ENST00000284637 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.3
SH3RF1-201ENST00000284637 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.3
SH3RF1-201ENST00000284637 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.3
SH3RF1-201ENST00000284637 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.3
SH3RF1-201ENST00000284637 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.3
SH3RF1-201ENST00000284637 K7EN84 100 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 M0R1W7 72 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 RBX1P62877 108 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 CRYBA4P53673 196 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 ZNF625Q96I27 306 aaPredicted RBP13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 JPT2Q9H910 190 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 PLCE1Q9P212 2302 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 ZNF747Q9BV97 191 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
SH3RF1-201ENST00000284637 OVOL3O00110 214 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 GHRHP01286 108 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 SH2D6Q7Z4S9 175 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 ZNF415Q09FC8 603 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 RASL10AQ92737 203 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 PRSS46E5RG02 174 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 NDUFB8O95169 186 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 WT1-ASQ06250 92 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 GAGE2AQ6NT46 116 aa13.19□□□□□ -0.3
SH3RF1-201ENST00000284637 SLC25A16P16260 332 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 MRPL51Q4U2R6 128 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 IL17RELQ6ZVW7 336 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 ZNF134P52741 427 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 TP53TG1Q9Y2A0 90 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 RLFQ13129 1914 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 DKK1O94907 266 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 SAA4P35542 130 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 C17orf58Q2M2W7 97 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 A0A087WX48 190 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 E7EQL1 145 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 PRIMA1Q86XR5 153 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 LY6G5BQ8NDX9 201 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 UBE2E2Q96LR5 201 aa13.18□□□□□ -0.3
SH3RF1-201ENST00000284637 BOD1L2Q8IYS8 172 aa13.17□□□□□ -0.3
SH3RF1-201ENST00000284637 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SH3RF1-201ENST00000284637 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
SH3RF1-201ENST00000284637 TRAV26-2A0A0B4J265 109 aa13.17□□□□□ -0.3
SH3RF1-201ENST00000284637 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
SH3RF1-201ENST00000284637 KNCNA6PVL3 124 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 SCRT2Q9NQ03 307 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 MALRD1Q5VYJ5 2156 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 HELZP42694 1942 aaKnown RBP13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 PMVKQ15126 192 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 PRADC1Q9BSG0 188 aa13.16□□□□□ -0.3
SH3RF1-201ENST00000284637 Q8N8P6 123 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 C6orf226Q5I0X4 101 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 LAMTOR3Q9UHA4 124 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 Q6ZS92 163 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 C15orf65H3BRN8 121 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 ZNF833PQ6ZTB9 187 aa13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
SH3RF1-201ENST00000284637 C8orf86Q6ZUL3 223 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 Q8NFD4 153 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR25Q96S07 402 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 PRO1854Q9UHT4 67 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 NEGR1Q7Z3B1 354 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 PLXND1Q9Y4D7 1925 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 G3V318 75 aa13.14□□□□□ -0.31
SH3RF1-201ENST00000284637 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 NPYP01303 97 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 PCP2Q8IVA1 136 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 IGLL5B9A064 214 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms