RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SNX29P2Q8IUI4 249 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 TMEM183AQ8IXX5 376 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 C10orf105Q8TEF2 133 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 C10orf82Q8WW14 230 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 ZNF799Q96GE5 643 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 AP1S3Q96PC3 154 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 DERL3Q96Q80 235 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 CAMK2N2Q96S95 79 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 MGLLQ99685 303 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 NKX6-2Q9C056 277 aaPredicted RBP3.22□□□□□ -1.89
CD44-202ENST00000278385 FGF23Q9GZV9 251 aaPredicted RBP3.22□□□□□ -1.89
CD44-202ENST00000278385 PDZD2O15018 2839 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 MYO9AB2RTY4 2548 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 AKAP9Q99996 3911 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 MPDZO75970 2070 aa3.21□□□□□ -1.89
CD44-202ENST00000278385 CELSR2Q9HCU4 2923 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 TRAV30A0A087WSZ9 112 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 LOC100130705A0A1B0GUX0 176 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 TMEM218A2RU14 115 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 TMEM212A6NML5 194 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 FXYD1O00168 92 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 UBE2L6O14933 153 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 NPFFO15130 113 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 PLA2G10O15496 165 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 NCR2O95944 276 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 IGHV3-11P01762 117 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 SRP19P09132 144 aaKnown RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 CD7P09564 240 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 LINC00869P0C866 280 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 IGLC6P0CF74 106 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 ZNF705DP0CH99 300 aaPredicted RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 ZNF728P0DKX0 622 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 CRISP2P16562 243 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 ZNF14P17017 642 aaPredicted RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 S100A2P29034 98 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 GUCA1AP43080 201 aaPredicted RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 FGF12P61328 243 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 RRN3P1Q2M238 152 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 KRTAP24-1Q3LI83 254 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 CGB2Q6NT52 195 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 MORN3Q6PF18 240 aaPredicted RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 ZNF525Q8N782 197 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 MAPK1IP1LQ8NDC0 245 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 OR8A1Q8NGG7 326 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 OR5A2Q8NGI9 324 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 TP73-AS1Q9UF72 201 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 BAIAP2Q9UQB8 552 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 ITPR2Q14571 2701 aa3.21□□□□□ -1.9
CD44-202ENST00000278385 PRRC2CQ9Y520 2896 aaKnown RBP3.21□□□□□ -1.9
CD44-202ENST00000278385 PCNX3Q9H6A9 2034 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 APCP25054 2843 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 ABCA12Q86UK0 2595 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 TEX15Q9BXT5 2789 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 ADGRG4Q8IZF6 3080 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 ABCA4P78363 2273 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 IGLV1-50A0A075B6I6 118 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 A0A096LNT2 108 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 IGKV1D-43A0A0B4J1Z2 117 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 GGT3PA6NGU5 568 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 IFITM5A6NNB3 132 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 GGTLC3B5MD39 225 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 M0R233 179 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 TAX1BP3O14907 124 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 NFYBP25208 207 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 GNG4P50150 75 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 PCBD1P61457 104 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 ATP5G2Q06055 141 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 RPL18Q07020 188 aaKnown RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 C10orf128Q5T292 105 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 C6orf52Q5T4I8 152 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 FAM27BQ5VT28 67 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 TMEM244Q5VVB8 128 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 H1FOOQ8IZA3 346 aaPredicted RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 RPP25LQ8N5L8 163 aaKnown RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 OR4S1Q8NGB4 309 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 PFN4Q8NHR9 129 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 C15orf40Q8WUR7 153 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 H1FXQ92522 213 aaKnown RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 TUBA4BQ9H853 241 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 DYNLRB1Q9NP97 96 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 CKLFQ9UBR5 152 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 F8P00451 2351 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 RAI1Q7Z5J4 1906 aaPredicted RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 SPG11Q96JI7 2443 aa3.2□□□□□ -1.9
CD44-202ENST00000278385 ANKHD1Q8IWZ3 2542 aaKnown RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 NUP214P35658 2090 aaPredicted RBP3.2□□□□□ -1.9
CD44-202ENST00000278385 ZNF469Q96JG9 3925 aaPredicted RBP3.19□□□□□ -1.9
CD44-202ENST00000278385 IGHV3OR15-7A0A075B7D8 119 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms