RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 BOD1L2Q8IYS8 172 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 IFI27L1Q96BM0 104 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 B9A039 149 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 SEC11AP67812 179 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 ZNF575Q86XF7 245 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 SMAD7O15105 426 aaKnown RBP13.29□□□□□ -0.28
SPG7-201ENST00000268704 CD3EP07766 207 aa13.29□□□□□ -0.28
SPG7-201ENST00000268704 PPIFP30405 207 aaKnown RBP13.29□□□□□ -0.28
SPG7-201ENST00000268704 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
SPG7-201ENST00000268704 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
SPG7-201ENST00000268704 KIR3DS1Q14943 382 aa13.29□□□□□ -0.28
SPG7-201ENST00000268704 IGLV11-55A0A075B6I3 123 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 EVI2AP22794 236 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
SPG7-201ENST00000268704 NCBP2LA6PVI3 153 aaKnown RBP13.28□□□□□ -0.28
SPG7-201ENST00000268704 CIDEAO60543 219 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 NDUFS7O75251 213 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 MFAP4P55083 255 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
SPG7-201ENST00000268704 PDE6HQ13956 83 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 DPM3Q9P2X0 92 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 A1L4Q6 167 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 IGHG4P01861 327 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 RNF5Q99942 180 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 SRSF8Q9BRL6 282 aaKnown RBP13.28□□□□□ -0.28
SPG7-201ENST00000268704 RAB1BQ9H0U4 201 aa13.28□□□□□ -0.28
SPG7-201ENST00000268704 ORM1P02763 201 aa13.27□□□□□ -0.28
SPG7-201ENST00000268704 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.28
SPG7-201ENST00000268704 ERCC8Q13216 396 aa13.27□□□□□ -0.28
SPG7-201ENST00000268704 C5orf64Q2M2E5 130 aa13.27□□□□□ -0.28
SPG7-201ENST00000268704 ADAMTSL5Q6ZMM2 481 aa13.27□□□□□ -0.28
SPG7-201ENST00000268704 C21orf62Q9NYP8 219 aa13.27□□□□□ -0.28
SPG7-201ENST00000268704 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.29
SPG7-201ENST00000268704 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
SPG7-201ENST00000268704 C9orf118A6NHY6 69 aa13.26□□□□□ -0.29
SPG7-201ENST00000268704 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
SPG7-201ENST00000268704 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
SPG7-201ENST00000268704 IGKV2D-26A0A0A0MRZ7 120 aa13.26□□□□□ -0.29
SPG7-201ENST00000268704 NDUFA3O95167 84 aa13.26□□□□□ -0.29
SPG7-201ENST00000268704 A0A0G2JLM5 398 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 FAM90A27PA6NNH2 459 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 PRAC2D3DTV9 90 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
SPG7-201ENST00000268704 MTURNQ8N3F0 131 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 DPF1Q92782 380 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 IGHV3-66A0A0C4DH42 116 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 A6NDN8 102 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 NPBQ8NG41 125 aa13.25□□□□□ -0.29
SPG7-201ENST00000268704 H3BRM9 83 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 HSD52Q0P140 79 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 IGHV3OR16-13A0A075B7E8 117 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 IGHV3-74A0A0B4J1X5 117 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 RPL7P18124 248 aaKnown RBP13.24□□□□□ -0.29
SPG7-201ENST00000268704 CTSGP08311 255 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 LEPP41159 167 aa13.24□□□□□ -0.29
SPG7-201ENST00000268704 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
SPG7-201ENST00000268704 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
SPG7-201ENST00000268704 G3V4G9 280 aa13.23□□□□□ -0.29
SPG7-201ENST00000268704 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
SPG7-201ENST00000268704 OR11H6Q8NGC7 330 aa13.22□□□□□ -0.29
SPG7-201ENST00000268704 OR9G4Q8NGQ1 327 aa13.22□□□□□ -0.29
SPG7-201ENST00000268704 CELSR1Q9NYQ6 3014 aa13.22□□□□□ -0.29
SPG7-201ENST00000268704 K7EP34 96 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 ZNF562Q6V9R5 426 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 IL17RELQ6ZVW7 336 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 GTF2H5Q6ZYL4 71 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 MAP1LC3AQ9H492 121 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 OR2K2Q8NGT1 345 aa13.21□□□□□ -0.29
SPG7-201ENST00000268704 K7ERJ3 54 aa13.21□□□□□ -0.3
SPG7-201ENST00000268704 TNFRSF6BO95407 300 aa13.21□□□□□ -0.3
SPG7-201ENST00000268704 PSMG3-AS1Q96PY0 264 aa13.21□□□□□ -0.3
SPG7-201ENST00000268704 IGHV3-49A0A0A0MS15 119 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 GCSHP23434 173 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 BMI1P35226 326 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 CEACAM3P40198 252 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 Q6ZQT7 251 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 TEX48A0A1B0GUV7 120 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 PRSS1P07477 247 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 AZU1P20160 251 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 FXYD2P54710 66 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 ODF1Q14990 250 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
SPG7-201ENST00000268704 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 TRGV3P03979 118 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 TRAV26-2A0A0B4J265 109 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 ODF3BA8MYP8 253 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 CDSNQ15517 529 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 GTSCR1Q86UQ5 136 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 OR4X2Q8NGF9 303 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 HHLA3Q9XRX5 114 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 TMEM158Q8WZ71 300 aa13.19□□□□□ -0.3
SPG7-201ENST00000268704 FOXC2Q99958 501 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms