RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 DPM2O94777 84 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 COX6CP09669 75 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 Q6AWC8 147 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 COX8AP10176 69 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 RPS20P60866 119 aaKnown RBP13.67□□□□□ -0.22
SRF-201ENST00000265354 WFDC2Q14508 124 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 RAXQ9Y2V3 346 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
SRF-201ENST00000265354 ADIPOQQ15848 244 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
SRF-201ENST00000265354 C2orf70A6NJV1 201 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 NBR2O15453 112 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 ABHD17AQ96GS6 310 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 METTL26Q96S19 204 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 IGLV2-8P01709 118 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 IGHV3-11P01762 117 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 NDPQ00604 133 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 ZNF747Q9BV97 191 aa13.66□□□□□ -0.22
SRF-201ENST00000265354 ABCA2Q9BZC7 2435 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE12JA6NER3 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE7O76087 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE12FP0CL80 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE12GP0CL81 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE12IP0CL82 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 GAGE4Q13068 117 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 LY6EQ16553 131 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 IGHV3-64A0A075B6Q5 118 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 SRD5A1P18405 259 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.65□□□□□ -0.22
SRF-201ENST00000265354 PSMB11A5LHX3 300 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 G3V4G9 280 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 NPYP01303 97 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 NPFFR1Q9GZQ6 430 aa13.65□□□□□ -0.22
SRF-201ENST00000265354 PF4V1P10720 104 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 CDX4O14627 284 aaPredicted RBP13.64□□□□□ -0.23
SRF-201ENST00000265354 FAM106CPP0CH98 169 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 GATA1P15976 413 aaPredicted RBP13.64□□□□□ -0.23
SRF-201ENST00000265354 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 TRANK1O15050 2925 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 ATP5LO75964 103 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 C3orf36Q3SXR2 165 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 DDB2Q92466 427 aa13.64□□□□□ -0.23
SRF-201ENST00000265354 CCDC144NLQ6NUI1 221 aa13.63□□□□□ -0.23
SRF-201ENST00000265354 MRPL51Q4U2R6 128 aaKnown RBP13.63□□□□□ -0.23
SRF-201ENST00000265354 VGLL1Q99990 258 aa13.63□□□□□ -0.23
SRF-201ENST00000265354 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
SRF-201ENST00000265354 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
SRF-201ENST00000265354 A0A1W2PNU3 283 aaPredicted RBP13.63□□□□□ -0.23
SRF-201ENST00000265354 Q8N7P7 452 aa13.63□□□□□ -0.23
SRF-201ENST00000265354 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
SRF-201ENST00000265354 APOBEC3AP31941 199 aaPredicted RBP13.62□□□□□ -0.23
SRF-201ENST00000265354 OR10J6PQ8NGY7 276 aa13.62□□□□□ -0.23
SRF-201ENST00000265354 TMEM8BA6NDV4 472 aa13.62□□□□□ -0.23
SRF-201ENST00000265354 CTRLP40313 264 aa13.62□□□□□ -0.23
SRF-201ENST00000265354 FAM104BQ5XKR9 115 aa13.62□□□□□ -0.23
SRF-201ENST00000265354 LOXL1Q08397 574 aaPredicted RBP13.62□□□□□ -0.23
SRF-201ENST00000265354 USP9YO00507 2555 aaPredicted RBP13.61□□□□□ -0.23
SRF-201ENST00000265354 DLX4Q92988 240 aaPredicted RBP13.61□□□□□ -0.23
SRF-201ENST00000265354 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
SRF-201ENST00000265354 MRPL23Q16540 153 aaKnown RBP13.61□□□□□ -0.23
SRF-201ENST00000265354 MEIG1Q5JSS6 88 aa13.61□□□□□ -0.23
SRF-201ENST00000265354 TRBV19A0A075B6N1 114 aa13.61□□□□□ -0.23
SRF-201ENST00000265354 IGHG3P01860 377 aa13.61□□□□□ -0.23
SRF-201ENST00000265354 ZNF815PA8K554 130 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 ZNF883P0CG24 379 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 PVRIGQ6DKI7 326 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 RNF183Q96D59 192 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
SRF-201ENST00000265354 WT1P19544 449 aaPredicted RBP13.6□□□□□ -0.23
SRF-201ENST00000265354 EDA2RQ9HAV5 297 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 TNFRSF6BO95407 300 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 EFNA4P52798 201 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 C9orf153Q5TBE3 101 aa13.6□□□□□ -0.23
SRF-201ENST00000265354 C15orf32Q32M92 178 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 NEU4Q8WWR8 484 aaPredicted RBP13.59□□□□□ -0.23
SRF-201ENST00000265354 VCX2Q9H322 139 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 YAE1D1Q9NRH1 226 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 PRSS29PA6NIE9 313 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 BUB1B-PAK6H3BSN5 160 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 IGLV1-44P01699 117 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 RNASE4P34096 147 aaKnown RBP13.59□□□□□ -0.23
SRF-201ENST00000265354 KLF5Q13887 457 aaPredicted RBP13.59□□□□□ -0.23
SRF-201ENST00000265354 DGAT2L7PQ6IED9 249 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 FAM57AQ8TBR7 257 aa13.59□□□□□ -0.23
SRF-201ENST00000265354 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
SRF-201ENST00000265354 IGLV3-9A0A075B6K5 115 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms