RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 DAD1P61803 113 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 INAFM2P0DMQ5 153 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 PRR30Q53SZ7 412 aaPredicted RBP14.38□□□□□ -0.11
COL5A3-201ENST00000264828 THAP8Q8NA92 274 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 SCRT2Q9NQ03 307 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 TRBV20-1A0A075B6N2 111 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 HLA-DRB4P13762 266 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 MRPL35Q9NZE8 188 aaKnown RBP14.38□□□□□ -0.11
COL5A3-201ENST00000264828 HLA-DRB4X5D2U9 266 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 CRLF1O75462 422 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 COX8AP10176 69 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 CACNA1DQ01668 2161 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 IGHV1OR15-1A0A075B7D0 117 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 BVES-AS1Q5T3Y7 98 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 ZNF833PQ6ZTB9 187 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 NPYP01303 97 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 HOXD3P31249 432 aaPredicted RBP14.37□□□□□ -0.11
COL5A3-201ENST00000264828 YPEL3P61236 119 aaPredicted RBP14.37□□□□□ -0.11
COL5A3-201ENST00000264828 VWC2Q2TAL6 325 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 CT83Q5H943 113 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 CLPSL2Q6UWE3 100 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 RTTNQ86VV8 2226 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 K7EP13 123 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 IFITM1P13164 125 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 ZC2HC1AQ96GY0 325 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 RS1O15537 224 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 NDUFA12Q9UI09 145 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 TINCRA0A1B0GVN0 87 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 SDK2Q58EX2 2172 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGKV1-39P01597 117 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGHG3P01860 377 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGKV1D-39P04432 117 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 C17orf58Q2M2W7 97 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 F8W1H4 67 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 UBL5Q9BZL1 73 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 A0A1W2PPM0 123 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 CARD19Q96LW7 228 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 H3BRN7 92 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 CEACAM8P31997 349 aaPredicted RBP14.35□□□□□ -0.11
COL5A3-201ENST00000264828 PRR25Q96S07 402 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 H3BMG7 143 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 RHODO00212 210 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 UBE2E1P51965 193 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 TMEM243Q9BU79 118 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 MMP23AO75900 390 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 WISP1O95388 367 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 RNF114Q9Y508 228 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 Q6ZS92 163 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 ATP6V0BQ99437 205 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 MSMBP08118 114 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 OR11H6Q8NGC7 330 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 LGALS9BQ3B8N2 356 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 LGALS9CQ6DKI2 356 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 PRB1P04280 392 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 DKK2Q9UBU2 259 aa14.33□□□□□ -0.11
COL5A3-201ENST00000264828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.33□□□□□ -0.12
COL5A3-201ENST00000264828 Q6ZR03 302 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 TRACP01848 142 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 PRO1854Q9UHT4 67 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 DIAPH2-AS1Q14236 149 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 FER1L5A0AVI2 2057 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV1-69DA0A0B4J2H0 117 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV1-69P01742 117 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 AMTNQ6UX39 209 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 DSCR8Q96T75 97 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 GATA4P43694 442 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 LY6G6EA0A0G2JKS1 128 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 UTF1Q5T230 341 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 U3KQA8 63 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 PRSS29PA6NIE9 313 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 CDKN1BP46527 198 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
COL5A3-201ENST00000264828 PTPRDP23468 1912 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 TCTEX1D4Q5JR98 221 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 ZNF503-AS2A6NEH8 195 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 C3orf56Q8N813 242 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 FAM120AOSQ5T036 256 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 GAGE12HA6NDE8 117 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 LMO1P25800 156 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 YLPM1P49750 1951 aaKnown RBP14.3□□□□□ -0.12
COL5A3-201ENST00000264828 IGHG4P01861 327 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 CEP290O15078 2479 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 FXYD5Q96DB9 178 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 K7ENP7 123 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 NDUFS7O75251 213 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 CFPP27918 469 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 FAM231DQ6ZW35 169 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 SMIM2Q9BVW6 85 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 K7EN84 100 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 MYLKQ15746 1914 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 C17orf77Q96MU5 243 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV2-70DA0A0C4DH43 119 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 J3QQQ9 107 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV2-5P01817 119 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 hADV29S1A0JD25 119 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms