RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-201ENST00000262554 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 IGHV4-59P01825 116 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 KRTDAPP60985 99 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 SRSF2Q01130 221 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 CFHR3Q02985 330 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 UBR5O95071 2799 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 FABP5P3A8MUU1 101 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 ZNF80P51504 273 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 DEFB113Q30KQ7 82 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 FAM209BQ5JX69 171 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 LYZL1Q6UWQ5 148 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 NIT1Q86X76 327 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 LRRC75A-AS1Q8N1F1 130 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 C16orf92Q96LL3 132 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 CRYBG3Q68DQ2 2970 aa9.91□□□□□ -0.82
SPTLC1-201ENST00000262554 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
SPTLC1-201ENST00000262554 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
SPTLC1-201ENST00000262554 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
SPTLC1-201ENST00000262554 NPFFR1Q9GZQ6 430 aa9.9□□□□□ -0.82
SPTLC1-201ENST00000262554 ZFYVE26Q68DK2 2539 aa9.9□□□□□ -0.83
SPTLC1-201ENST00000262554 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 M0R2Z0 102 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 IGHV4-31P0DP07 118 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 SMAD7O15105 426 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 ORM1P02763 201 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 ZNF138P52744 262 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 Q5PR19 223 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 TEX43Q6ZNM6 134 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 IL17RELQ6ZVW7 336 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 FER1L6-AS1Q8NA97 138 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 AGPAT4-IT1Q9H0P7 198 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 RNF114Q9Y508 228 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 CR1P17927 2039 aa9.89□□□□□ -0.83
SPTLC1-201ENST00000262554 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 CTRLP40313 264 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 CELSR2Q9HCU4 2923 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 VPS13CQ709C8 3753 aa9.88□□□□□ -0.83
SPTLC1-201ENST00000262554 FSHBP01225 129 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 C3orf79P0CE67 100 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 ZNF738Q8NE65 137 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 PPP1R14DQ9NXH3 145 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 PEF1Q9UBV8 284 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 VPREB3Q9UKI3 123 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 TMEM89A2RUT3 159 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 FAM181BA6NEQ2 426 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 LINC00614P0C842 121 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 IGLC6P0CF74 106 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 PSMB8P28062 276 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 VAMP8Q9BV40 100 aa9.87□□□□□ -0.83
SPTLC1-201ENST00000262554 IGHV7-4-1A0A0J9YVY3 117 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 FAM106AQ4KMX7 169 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 CYB5R2Q6BCY4 276 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 Q6YL49 198 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 C14orf144Q96I85 54 aa9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 DAZ1Q9NQZ3 744 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-201ENST00000262554 M0QZ24 198 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 RAB4AP20338 218 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 SSTP61278 116 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 RPL11P62913 178 aaKnown RBP9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 TWIST1Q15672 202 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 Q8N976 141 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 C20orf173Q96LM9 149 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 Q96MF0 132 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 NDUFAF3Q9BU61 184 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 FBN2P35556 2912 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 K7EMT4 169 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 OVOL1O14753 267 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 FAM104BQ5XKR9 115 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 GPHB5Q86YW7 130 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 LENEPQ9Y5L5 61 aa9.85□□□□□ -0.83
SPTLC1-201ENST00000262554 CSPG4Q6UVK1 2322 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 IGHV1-24A0A0C4DH33 117 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 MUC21A0A0G2JKD1 596 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 MUC21A0A140T8X8 626 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 SOCS3O14543 225 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 BTF3P20290 206 aaKnown RBP9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
SPTLC1-201ENST00000262554 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms