RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ADAMTSL5Q6ZMM2 481 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 IGHV3-66A0A0C4DH42 116 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 RPL24P83731 157 aaKnown RBP14.01□□□□□ -0.17
TRAF4-201ENST00000262395 NDPQ00604 133 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 ANKHD1Q8IWZ3 2542 aaKnown RBP14.01□□□□□ -0.17
TRAF4-201ENST00000262395 IGHV3OR16-13A0A075B7E8 117 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 IGHV3-74A0A0B4J1X5 117 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 F8W735 103 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-201ENST00000262395 PAX8Q06710 450 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 SAMD13Q5VXD3 122 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 OR2K2Q8NGT1 345 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 CEP295Q9C0D2 2601 aa14□□□□□ -0.17
TRAF4-201ENST00000262395 GCSHP23434 173 aa14□□□□□ -0.17
TRAF4-201ENST00000262395 MFAP4P55083 255 aa14□□□□□ -0.17
TRAF4-201ENST00000262395 HSD52Q0P140 79 aa14□□□□□ -0.17
TRAF4-201ENST00000262395 LEPP41159 167 aa14□□□□□ -0.17
TRAF4-201ENST00000262395 RNF182Q8N6D2 247 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 SMAD5-AS1Q9Y6J3 95 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 FBLL1A6NHQ2 334 aaKnown RBP13.99□□□□□ -0.17
TRAF4-201ENST00000262395 K7ERJ3 54 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 PRSS1P07477 247 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 GRNP28799 593 aaKnown RBP13.99□□□□□ -0.17
TRAF4-201ENST00000262395 ZNF575Q86XF7 245 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 GTSF1LQ9H1H1 148 aa13.99□□□□□ -0.17
TRAF4-201ENST00000262395 PRAC2D3DTV9 90 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 K7EP34 96 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 C21orf62Q9NYP8 219 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 DPM3Q9P2X0 92 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 CD3EP07766 207 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 SPCS1Q9Y6A9 102 aa13.98□□□□□ -0.17
TRAF4-201ENST00000262395 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
TRAF4-201ENST00000262395 IGHG4P01861 327 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 GTSCR1Q86UQ5 136 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 Q8NA96 180 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 JKAMPQ9P055 326 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 SMAGPQ0VAQ4 97 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 OR9G4Q8NGQ1 327 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 CFHR4Q92496 578 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 RNF185Q96GF1 192 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 RAB1BQ9H0U4 201 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 IGLV11-55A0A075B6I3 123 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 B9A039 149 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 FXYD2P54710 66 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 PDE6HQ13956 83 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 C5orf64Q2M2E5 130 aa13.97□□□□□ -0.17
TRAF4-201ENST00000262395 ZNF672Q499Z4 452 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-201ENST00000262395 IGHV3-49A0A0A0MS15 119 aa13.96□□□□□ -0.17
TRAF4-201ENST00000262395 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
TRAF4-201ENST00000262395 DPF1Q92782 380 aa13.96□□□□□ -0.17
TRAF4-201ENST00000262395 ARPC1AQ92747 370 aa13.96□□□□□ -0.18
TRAF4-201ENST00000262395 MAP1LC3AQ9H492 121 aa13.96□□□□□ -0.18
TRAF4-201ENST00000262395 A0A1W2PPM0 123 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 FOXC2Q99958 501 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 FAM90A27PA6NNH2 459 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 TNFRSF6BO95407 300 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 IGLC6P0CF74 106 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 RPL7P18124 248 aaKnown RBP13.95□□□□□ -0.18
TRAF4-201ENST00000262395 OR4X2Q8NGF9 303 aa13.95□□□□□ -0.18
TRAF4-201ENST00000262395 Q6ZQT7 251 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 RNF5Q99942 180 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 TRAV26-2A0A0B4J265 109 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 ZNF207O43670 478 aaKnown RBP13.94□□□□□ -0.18
TRAF4-201ENST00000262395 CTSGP08311 255 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 NEGR1Q7Z3B1 354 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 TMEM158Q8WZ71 300 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 AKAP6Q13023 2319 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 BMI1P35226 326 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 NPFFR1Q9GZQ6 430 aa13.94□□□□□ -0.18
TRAF4-201ENST00000262395 AZU1P20160 251 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 ODF1Q14990 250 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 SRSF8Q9BRL6 282 aaKnown RBP13.93□□□□□ -0.18
TRAF4-201ENST00000262395 HRNRQ86YZ3 2850 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-201ENST00000262395 PRSS47A8MTI9 375 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 TRGV3P03979 118 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 SAMD5Q5TGI4 173 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 COL25A1Q9BXS0 654 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-201ENST00000262395 TMEM160Q9NX00 188 aa13.93□□□□□ -0.18
TRAF4-201ENST00000262395 TEX48A0A1B0GUV7 120 aa13.92□□□□□ -0.18
TRAF4-201ENST00000262395 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
TRAF4-201ENST00000262395 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
TRAF4-201ENST00000262395 NDUFA3O95167 84 aa13.92□□□□□ -0.18
TRAF4-201ENST00000262395 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 SPRY2O43597 315 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 SMIM13P0DJ93 91 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 FABP2P12104 132 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 ZC2HC1BQ5TFG8 222 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 IGF2-ASQ6U949 168 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 NPBQ8NG41 125 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 CHAC1Q9BUX1 264 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
TRAF4-201ENST00000262395 DTX2Q86UW9 622 aa13.91□□□□□ -0.18
TRAF4-201ENST00000262395 TMEM8BA6NDV4 472 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 SIVA1O15304 175 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 FCER1GP30273 86 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 C11orf21Q9P2W6 132 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 UFC1Q9Y3C8 167 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms