RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 DIRC3C9JPN6 131 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 C3orf84H3BNL1 204 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 TEX46H3BTG2 121 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 IGKV2D-40P01614 121 aaPredicted RBP13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 CT45A10P0DMU9 189 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 CD300CQ08708 224 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 C9orf62Q8N4C0 152 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 C5orf17Q8NAS9 161 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 AGPAT4-IT1Q9H0P7 198 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 RPH3ALQ9UNE2 315 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 X6R8D5 127 aa13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 TRAV12-2A0A075B6T6 113 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 NMBP08949 121 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 ZNF138P52744 262 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 ERCC8Q13216 396 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 RRN3P1Q2M238 152 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 SFT2D1Q8WV19 159 aa13.59□□□□□ -0.23
CYSTM1-201ENST00000261811 IGHV4-28A0A0C4DH34 117 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 TRBV7-9A0A0J9YWB2 115 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 CRXO43186 299 aaPredicted RBP13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 GPX1P07203 203 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 PPT1P50897 306 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 C1orf158Q8N1D5 194 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 Q8NAQ8 132 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 MBD3L1Q8WWY6 194 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 LINC01587Q99440 93 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 NIPSNAP3BQ9BS92 247 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 ZNF492Q9P255 531 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 LENEPQ9Y5L5 61 aa13.58□□□□□ -0.24
CYSTM1-201ENST00000261811 FHITP49789 147 aa13.57□□□□□ -0.24
CYSTM1-201ENST00000261811 VGLL1Q99990 258 aa13.57□□□□□ -0.24
CYSTM1-201ENST00000261811 FBLL1A6NHQ2 334 aaKnown RBP13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 H7BYZ3 331 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 J3KRW8 73 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 IFNA7P01567 189 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 C11orf45Q8TAV5 145 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 TMPRSS5Q9H3S3 457 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
CYSTM1-201ENST00000261811 TEX48A0A1B0GUV7 120 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 DEFB4AO15263 64 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 CRISP2P16562 243 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 SULT1A2P50226 295 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 TAS2R60P59551 318 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 UBE2G2P60604 165 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 NDFIP1Q9BT67 221 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 EPDR1Q9UM22 224 aa13.55□□□□□ -0.24
CYSTM1-201ENST00000261811 LOC102723971A0A1B0GUV8 181 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 C7orf71A4D174 169 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 F6UZH7 168 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 TCRAP04437 139 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 CCDC28AQ8IWP9 274 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 PLA2G2EQ9NZK7 142 aa13.54□□□□□ -0.24
CYSTM1-201ENST00000261811 TRAV12-3A0A0B4J271 114 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 FAM74A7A6NL05 159 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 KLLNB2CW77 178 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 HTN1P15515 57 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 CST9LP1Q5W188 147 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 CYB561D1Q8N8Q1 229 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 ATG101Q9BSB4 218 aa13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
CYSTM1-201ENST00000261811 CXorf65A6NEN9 183 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 GGTLC3B5MD39 225 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 GNG5P63218 68 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 Q8TAT8 98 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 HIST1H2BAQ96A08 127 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 PYGO2Q9BRQ0 406 aa13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
CYSTM1-201ENST00000261811 A0A1B0GV50 99 aa13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 SPART-AS1P0CW21 52 aa13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 EMP1P54849 157 aa13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 C16orf74Q96GX8 76 aa13.51□□□□□ -0.25
CYSTM1-201ENST00000261811 TRAV1-1A0A0B4J248 108 aa13.5□□□□□ -0.25
CYSTM1-201ENST00000261811 ZNF705GA8MUZ8 300 aaPredicted RBP13.5□□□□□ -0.25
CYSTM1-201ENST00000261811 TMEM75Q8N9X5 138 aa13.5□□□□□ -0.25
CYSTM1-201ENST00000261811 MANBALQ9NQG1 85 aa13.5□□□□□ -0.25
CYSTM1-201ENST00000261811 PAGE4O60829 102 aa13.49□□□□□ -0.25
CYSTM1-201ENST00000261811 BTN1A1Q13410 526 aa13.49□□□□□ -0.25
CYSTM1-201ENST00000261811 KIR3DS1Q14943 382 aa13.49□□□□□ -0.25
CYSTM1-201ENST00000261811 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
CYSTM1-201ENST00000261811 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
CYSTM1-201ENST00000261811 NUPR2A6NF83 97 aa13.48□□□□□ -0.25
CYSTM1-201ENST00000261811 PEX7O00628 323 aa13.48□□□□□ -0.25
CYSTM1-201ENST00000261811 RGS13O14921 159 aa13.48□□□□□ -0.25
CYSTM1-201ENST00000261811 IFNA1P01562 189 aa13.48□□□□□ -0.25
CYSTM1-201ENST00000261811 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
CYSTM1-201ENST00000261811 PMS2P11Q13670 270 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms