RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 K7EMT4 169 aa17■□□□□ 0.31
SIX3-201ENST00000260653 TYMSP04818 313 aa17■□□□□ 0.31
SIX3-201ENST00000260653 RNASE1P07998 156 aaKnown RBP17■□□□□ 0.31
SIX3-201ENST00000260653 RBX1P62877 108 aa17■□□□□ 0.31
SIX3-201ENST00000260653 DDTP30046 118 aa17■□□□□ 0.31
SIX3-201ENST00000260653 DEFB136Q30KP8 78 aa17■□□□□ 0.31
SIX3-201ENST00000260653 HIVEP1P15822 2718 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 C19orf71A6NCJ1 209 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 Q8TAT8 98 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 C8orf49Q96NF6 230 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 ZNF492Q9P255 531 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 UFC1Q9Y3C8 167 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 HOXD3P31249 432 aaPredicted RBP16.99■□□□□ 0.31
SIX3-201ENST00000260653 SYNJ2BPP57105 145 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 ZNF418Q8TF45 676 aaPredicted RBP16.99■□□□□ 0.31
SIX3-201ENST00000260653 C16orf92Q96LL3 132 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 TMEM213A2RRL7 107 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 RPL11P62913 178 aaKnown RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 KHDC1LQ5JSQ8 128 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 NSD1Q96L73 2696 aaPredicted RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 SMIM27A0A1W2PRY6 76 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 ZNF25P17030 456 aaPredicted RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 IGKV3-7A0A075B6H7 116 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 PHOX2AO14813 284 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 HILS1P60008 231 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 P01737 135 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 CDX1P47902 265 aaPredicted RBP16.97■□□□□ 0.31
SIX3-201ENST00000260653 FRZBQ92765 325 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 BTF3L4Q96K17 158 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 TRAV9-1A0A075B6T8 112 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 ERCC8Q13216 396 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 RPP21Q9H633 154 aaKnown RBP16.96■□□□□ 0.31
SIX3-201ENST00000260653 NRN1Q9NPD7 142 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 SOCS3O14543 225 aa16.96■□□□□ 0.3
SIX3-201ENST00000260653 SPINK4O60575 86 aa16.96■□□□□ 0.3
SIX3-201ENST00000260653 DAZAP1Q96EP5 407 aaKnown RBP16.96■□□□□ 0.3
SIX3-201ENST00000260653 A8MWP6 167 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 FRMD6-AS1P0C7T7 363 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 FABP9Q0Z7S8 132 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 C20orf173Q96LM9 149 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 DLEU1O43261 78 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BKO60814 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BJP06899 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BOP23527 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BBP33778 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BDP58876 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BCP62807 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST2H2BEQ16778 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 WIPF2Q8TF74 440 aaPredicted RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 C4orf3Q8WVX3 66 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BHQ93079 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 MRPL53Q96EL3 112 aaKnown RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 PRR25Q96S07 402 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BNQ99877 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BMQ99879 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 CRIP1P50238 77 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 SETXQ7Z333 2677 aaKnown RBP16.94■□□□□ 0.3
SIX3-201ENST00000260653 SLURP1P55000 103 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 TSKUQ8WUA8 353 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 DUX3Q96PT4 197 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 NPIPB6E9PJ23 425 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 LGALS9O00182 355 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 TRGC1P0CF51 173 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 RBAKDNA6NC62 111 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 FBLL1A6NHQ2 334 aaKnown RBP16.93■□□□□ 0.3
SIX3-201ENST00000260653 GAGE1Q13065 139 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 ACTL10Q5JWF8 245 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 KLHL30-AS1Q8NEE0 82 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 LINC01006Q8NI28 216 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 NPSP0C0P6 89 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 OR11H1Q8NG94 326 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 WFDC12Q8WWY7 111 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 CT45A10P0DMU9 189 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 KLF5Q13887 457 aaPredicted RBP16.92■□□□□ 0.3
SIX3-201ENST00000260653 ODF1Q14990 250 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CT83Q5H943 113 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 ZNF738Q8NE65 137 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 NUP35Q8NFH5 326 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CLEC5AQ9NY25 188 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 HIGD1CA8MV81 97 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 LINC01619G3V211 115 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CBLN1P23435 193 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 MRPL54Q6P161 138 aaKnown RBP16.91■□□□□ 0.3
SIX3-201ENST00000260653 OR2D3Q8NGH3 330 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 AGPAT4-IT1Q9H0P7 198 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 C16orf95Q9H693 158 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 FN1P02751 2386 aaKnown RBP16.9■□□□□ 0.3
SIX3-201ENST00000260653 IZUMO1RA6ND01 250 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 CDKN1BP46527 198 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 RPL19P84098 196 aaKnown RBP16.9■□□□□ 0.3
SIX3-201ENST00000260653 NAT8BQ9UHF3 227 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 TRAPPC1Q9Y5R8 145 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 A8MWL6 223 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 TMEM238C9JI98 176 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 ZNF705DP0CH99 300 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms