RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 NSUN5P1Q3KNT7 163 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 C1orf122Q6ZSJ8 110 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 C1orf159Q96HA4 380 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 SPXQ9BT56 116 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 ANAPC10Q9UM13 185 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 TFF1P04155 84 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 CD33P20138 364 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 ZNF134P52741 427 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 TCF15Q12870 199 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 FAM104BQ5XKR9 115 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 ZNF833PQ6ZTB9 187 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 TP53TG1Q9Y2A0 90 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 MYO9AB2RTY4 2548 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 PINLYPA6NC86 204 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 SLC25A16P16260 332 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 RPL32P62910 135 aaKnown RBP3.89□□□□□ -1.79
RC3H1-201ENST00000258349 FAM231DQ6ZW35 169 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 BMPERQ8N8U9 685 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 A0A087WWL8 130 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 GATA4P43694 442 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 EFNA4P52798 201 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 YPEL3P61236 119 aaPredicted RBP3.89□□□□□ -1.79
RC3H1-201ENST00000258349 METRNQ9UJH8 293 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 STPG4Q8N801 248 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 TRBV25-1A0A075B6N4 114 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 H3BQ85 93 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 PSPNO60542 156 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 Q6ZWC4 215 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 THAP8Q8NA92 274 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 UBL5Q9BZL1 73 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 NDUFA4L2Q9NRX3 87 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 BDP1A6H8Y1 2624 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 K7EP13 123 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 EREGO14944 169 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 GATA3P23771 443 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 NDPQ00604 133 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 MRPL51Q4U2R6 128 aaKnown RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 HLA-DRB4P13762 266 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 HLA-DRB4X5D2U9 266 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 FXYD7P58549 80 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 ZNF672Q499Z4 452 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 PIP4P2Q8N4L2 257 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 MRAPQ8TCY5 172 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 NTN3O00634 580 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 PSCAO43653 123 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 LGALS9BQ3B8N2 356 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 LGALS9CQ6DKI2 356 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 RNF114Q9Y508 228 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 ARMS2P0C7Q2 107 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 MST1LQ2TV78 715 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 LINC01356Q8N9X3 169 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 Q8TCH9 128 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 WIPF2Q8TF74 440 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 HS3ST6Q96QI5 342 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 ACACBO00763 2458 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 B4DSR2 109 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 TMEM258P61165 79 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 KLHL30-AS1Q8NEE0 82 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 RNF166Q96A37 237 aaPredicted RBP3.88□□□□□ -1.79
RC3H1-201ENST00000258349 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
RC3H1-201ENST00000258349 A0A1W2PPI3 338 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 SLAQ13239 276 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 PRSS57Q6UWY2 283 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 V9GYV3 84 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 IGHV2-5P01817 119 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 KLRD1Q13241 179 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 BVES-AS1Q5T3Y7 98 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 FOXL2NBQ6ZUU3 175 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 WFDC12Q8WWY7 111 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 GAGE12HA6NDE8 117 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 KLF5Q13887 457 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-201ENST00000258349 RHOHQ15669 191 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 ZNF114Q8NC26 417 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 A0A0G2JNJ9 132 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 IGKV1-16P04430 117 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 Q9UFV3 132 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 HERVK_113P63121 156 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 MDS2Q8NDY4 140 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 PYGO2Q9BRQ0 406 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 SIGLEC8Q9NYZ4 499 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 PRSS47A8MTI9 375 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 C10orf55Q5SWW7 151 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 F8VRH5 84 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 AZU1P20160 251 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 LCNL1Q6ZST4 164 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 SPACA3Q8IXA5 215 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 C20orf78Q9BR46 151 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 TRBV19A0A075B6N1 114 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 IGHG3P01860 377 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 CITED1Q99966 193 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 SHISA9B4DS77 424 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 FGF6P10767 208 aa3.87□□□□□ -1.79
RC3H1-201ENST00000258349 CEACAM8P31997 349 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-201ENST00000258349 TMEM243Q9BU79 118 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms