RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ID1P41134 155 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 ERVFC1-1P60608 527 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 OSTCQ9NRP0 149 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 K7EQG2 157 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 DEFB114Q30KQ6 69 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 ZNF738Q8NE65 137 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 OR10G8Q8NGN5 311 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 BIN3Q9NQY0 253 aa7.11□□□□□ -1.27
NIP7-202ENST00000254941 PAFAH1B2P68402 229 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 SAPCD1Q5SSQ6 148 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
NIP7-202ENST00000254941 FAM231DQ6ZW35 169 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 COX8CQ7Z4L0 72 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 WFDC3Q8IUB2 231 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 C15orf54Q8N8G6 183 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 DYNLRB2Q8TF09 96 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 PRR25Q96S07 402 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 CITED1Q99966 193 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 RNASE7Q9H1E1 156 aaKnown RBP7.1□□□□□ -1.27
NIP7-202ENST00000254941 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
NIP7-202ENST00000254941 TRAV2A0A0B4J234 112 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 COLCA2A8K830 154 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
NIP7-202ENST00000254941 ERCC8Q13216 396 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 ELOBQ15370 118 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
NIP7-202ENST00000254941 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 FAM24BQ8N5W8 94 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.09□□□□□ -1.27
NIP7-202ENST00000254941 Q8TAT8 98 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 AGPAT4-IT1Q9H0P7 198 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 URGCP-MRPS24S4R325 110 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 V9GYV3 84 aa7.09□□□□□ -1.27
NIP7-202ENST00000254941 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.28
NIP7-202ENST00000254941 TFPI2P48307 235 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 ZNF138P52744 262 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 TMEM78Q5T7P6 136 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 LCE2CQ5TA81 110 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 LINC00322Q6ZN03 302 aaPredicted RBP7.09□□□□□ -1.28
NIP7-202ENST00000254941 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 NUDT11Q96G61 164 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 ZC2HC1AQ96GY0 325 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 ASCL2Q99929 193 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 ZNF492Q9P255 531 aa7.09□□□□□ -1.28
NIP7-202ENST00000254941 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 ZNF688P0C7X2 276 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 CD300EQ496F6 205 aaPredicted RBP7.08□□□□□ -1.28
NIP7-202ENST00000254941 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 OR10J6PQ8NGY7 276 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 C8orf49Q96NF6 230 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 NDFIP1Q9BT67 221 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 GPR61Q9BZJ8 451 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 LENEPQ9Y5L5 61 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 NOTCH3Q9UM47 2321 aa7.08□□□□□ -1.28
NIP7-202ENST00000254941 ZNF705GA8MUZ8 300 aaPredicted RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 PF4P02776 101 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 ZNF705DP0CH99 300 aaPredicted RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 ZNF705BP0CI00 300 aaPredicted RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 CT45A10P0DMU9 189 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 S100PP25815 95 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 CRIP1P50238 77 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 DEFB1P60022 68 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 PSMG4Q5JS54 123 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 IL36BQ9NZH7 164 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 TRBV24-1A0A075B6N3 115 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 F6UB75 175 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 P01737 135 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 SMUG1Q53HV7 270 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 KCNIP4Q6PIL6 250 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 LINC00482Q8N8I6 264 aa7.07□□□□□ -1.28
NIP7-202ENST00000254941 DAZAP1Q96EP5 407 aaKnown RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 ZNF256Q9Y2P7 627 aaPredicted RBP7.07□□□□□ -1.28
NIP7-202ENST00000254941 IZUMO1RA6ND01 250 aa7.06□□□□□ -1.28
NIP7-202ENST00000254941 GATCO43716 136 aaKnown RBP7.06□□□□□ -1.28
NIP7-202ENST00000254941 IGLV1-51P01701 117 aa7.06□□□□□ -1.28
NIP7-202ENST00000254941 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
NIP7-202ENST00000254941 CT83Q5H943 113 aa7.06□□□□□ -1.28
NIP7-202ENST00000254941 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
NIP7-202ENST00000254941 PYGO2Q9BRQ0 406 aa7.06□□□□□ -1.28
NIP7-202ENST00000254941 TGIF2-C20orf24A0A0A6YYL0 155 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 TRBV7-9A0A0J9YWB2 115 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 A0A0J9YX75 114 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 SMIM27A0A1W2PRY6 76 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 OR4C46A6NHA9 309 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 COL6A5A8TX70 2615 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 SAP30O75446 220 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
NIP7-202ENST00000254941 CXCL1P09341 107 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms