RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GNPNAT1Q96EK6 184 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-201ENST00000254193 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
SNRPA1-201ENST00000254193 TEX48A0A1B0GUV7 120 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 LY6G6CO95867 125 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 MBP02144 154 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 CSN1S1P47710 185 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 FAM19A4Q96LR4 140 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 NIPSNAP3BQ9BS92 247 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 OTORQ9NRC9 128 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 CYTL1Q9NRR1 136 aa12.8□□□□□ -0.36
SNRPA1-201ENST00000254193 PGPA6NDG6 321 aa12.79□□□□□ -0.36
SNRPA1-201ENST00000254193 TAAR5O14804 337 aa12.79□□□□□ -0.36
SNRPA1-201ENST00000254193 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
SNRPA1-201ENST00000254193 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
SNRPA1-201ENST00000254193 Q8TAT8 98 aa12.79□□□□□ -0.36
SNRPA1-201ENST00000254193 C7orf71A4D174 169 aa12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 KLLNB2CW77 178 aa12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 SLC25A5P05141 298 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 CD300CQ08708 224 aa12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 SSX7Q7RTT5 188 aa12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 ACTR3CQ9C0K3 210 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
SNRPA1-201ENST00000254193 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 GPX1P07203 203 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 HTN3P15516 51 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 CRISP2P16562 243 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 GCHFRP30047 84 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 ZNF138P52744 262 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 DAD1P61803 113 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 BTN1A1Q13410 526 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 LCE2DQ5TA82 110 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 KCNRGQ8N5I3 272 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 ZFAND2AQ8N6M9 145 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 RNASE8Q8TDE3 154 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 C16orf74Q96GX8 76 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 APLNQ9ULZ1 77 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 RPH3ALQ9UNE2 315 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 SACSQ9NZJ4 4579 aa12.77□□□□□ -0.37
SNRPA1-201ENST00000254193 RYR2Q92736 4967 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 LYRM9A8MSI8 78 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 DEFB130BP0DP73 79 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 DEFB130AP0DP74 79 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 PRR9Q5T870 116 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 TMEM263Q8WUH6 116 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-201ENST00000254193 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 HMSDA8MTL9 139 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 NMBP08949 121 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 TCTAP57738 103 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 ZNF345Q14585 488 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 ZNF726P1Q15940 193 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 FAM74A1Q5RGS3 127 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 Q6ZQT7 251 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 ARPC5LQ9BPX5 153 aa12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 NOP10Q9NPE3 64 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-201ENST00000254193 CXorf1O96002 111 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 GNG5P63218 68 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 SUN5Q8TC36 379 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-201ENST00000254193 LGALS9CQ6DKI2 356 aa12.73□□□□□ -0.37
SNRPA1-201ENST00000254193 Q6ZNX1 250 aa12.73□□□□□ -0.37
SNRPA1-201ENST00000254193 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
SNRPA1-201ENST00000254193 ST6GAL2Q96JF0 529 aa12.73□□□□□ -0.37
SNRPA1-201ENST00000254193 A0A0D9SG52 128 aa12.72□□□□□ -0.37
SNRPA1-201ENST00000254193 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
SNRPA1-201ENST00000254193 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
SNRPA1-201ENST00000254193 TMEM167BQ9NRX6 74 aa12.72□□□□□ -0.37
SNRPA1-201ENST00000254193 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.37
SNRPA1-201ENST00000254193 ARL6IP6Q8N6S5 226 aa12.71□□□□□ -0.37
SNRPA1-201ENST00000254193 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
SNRPA1-201ENST00000254193 CBY3A6NI87 242 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 BCL2L11O43521 198 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 FGF8P55075 233 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 EIF4E3Q8N5X7 224 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 C5orf17Q8NAS9 161 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 LINC00467Q9BRT7 94 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 ZNF471Q9BX82 626 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
SNRPA1-201ENST00000254193 KANTRA0A1W2PQU2 76 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 SNURFLB1AK76 121 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 RGS13O14921 159 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms