RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 GAGE12JA6NER3 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 NDUFS7O75251 213 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 GAGE7O76087 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 GAGE12FP0CL80 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 GAGE12GP0CL81 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 GAGE12IP0CL82 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 SRSF1Q07955 248 aaKnown RBP eCLIP15.68■□□□□ 0.1
HOXC13-201ENST00000243056 GAGE4Q13068 117 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 RPL39P5Q59GN2 51 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.68■□□□□ 0.1
HOXC13-201ENST00000243056 DAZAP1Q96EP5 407 aaKnown RBP15.68■□□□□ 0.1
HOXC13-201ENST00000243056 DYNLRB1Q9NP97 96 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 POLQO75417 2590 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 MED13LQ71F56 2210 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 FABP5P3A8MUU1 101 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 HBDP02042 147 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 HSPE1P61604 102 aaKnown RBP15.68■□□□□ 0.1
HOXC13-201ENST00000243056 PAX8Q06710 450 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 OR13A1Q8NGR1 328 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 HHLA3Q9XRX5 114 aa15.68■□□□□ 0.1
HOXC13-201ENST00000243056 USP9YO00507 2555 aaPredicted RBP15.67■□□□□ 0.1
HOXC13-201ENST00000243056 FBN2P35556 2912 aa15.67■□□□□ 0.1
HOXC13-201ENST00000243056 ZNF672Q499Z4 452 aaPredicted RBP15.67■□□□□ 0.1
HOXC13-201ENST00000243056 CD177Q8N6Q3 437 aa15.67■□□□□ 0.1
HOXC13-201ENST00000243056 CCL17Q92583 94 aa15.67■□□□□ 0.1
HOXC13-201ENST00000243056 TMEM133Q9H2Q1 129 aa15.67■□□□□ 0.1
HOXC13-201ENST00000243056 NBPF19A0A087WUL8 3843 aa15.67■□□□□ 0.1
HOXC13-201ENST00000243056 HELZ2Q9BYK8 2649 aaKnown RBP15.67■□□□□ 0.1
HOXC13-201ENST00000243056 TRBV20-1A0A075B6N2 111 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 A0A1B0GUT8 65 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 ZNRF1Q8ND25 227 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 C8orf46Q8TAG6 207 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 TMEM14BQ9NUH8 114 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 IGKV1D-17A0A075B6S4 117 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 PATE2Q6UY27 113 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 DCTN5Q9BTE1 182 aa15.66■□□□□ 0.1
HOXC13-201ENST00000243056 FOXA2Q9Y261 457 aaPredicted RBP15.66■□□□□ 0.1
HOXC13-201ENST00000243056 PGPA6NDG6 321 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 D6R8Y8 96 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 AJUBAQ96IF1 538 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 RITA1Q96K30 269 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 SRRM5B3KS81 715 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 COL8A1P27658 744 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 NDUFV3P56181 108 aaKnown RBP15.65■□□□□ 0.1
HOXC13-201ENST00000243056 MORN3Q6PF18 240 aaPredicted RBP15.65■□□□□ 0.1
HOXC13-201ENST00000243056 GTSCR1Q86UQ5 136 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 Q8IYB0 196 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 GATD1Q8NB37 220 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 VPREB3Q9UKI3 123 aa15.65■□□□□ 0.1
HOXC13-201ENST00000243056 FSTL3O95633 263 aa15.64■□□□□ 0.09
HOXC13-201ENST00000243056 CIARTQ8N365 385 aaPredicted RBP15.64■□□□□ 0.09
HOXC13-201ENST00000243056 COX7A2P2O60397 106 aa15.64■□□□□ 0.09
HOXC13-201ENST00000243056 SRD5A1P18405 259 aa15.64■□□□□ 0.09
HOXC13-201ENST00000243056 MAPKAPK5-AS1Q8N8E1 139 aa15.64■□□□□ 0.09
HOXC13-201ENST00000243056 PPDPFLQ8WWR9 84 aa15.64■□□□□ 0.09
HOXC13-201ENST00000243056 RHODO00212 210 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 ATP5J2P56134 94 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 EDDM3AQ14507 147 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 SLC25A48Q6ZT89 311 aaKnown RBP15.63■□□□□ 0.09
HOXC13-201ENST00000243056 FAM90A1Q86YD7 464 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 LHBP01229 141 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 PRDX2P32119 198 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 C10orf113Q5VZT2 155 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 C1orf229Q6ZS94 237 aaPredicted RBP15.63■□□□□ 0.09
HOXC13-201ENST00000243056 PDPNQ86YL7 162 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 ZNF714Q96N38 554 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 S1PR3Q99500 378 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 PPDPFQ9H3Y8 114 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 ZMAT4Q9H898 229 aa15.63■□□□□ 0.09
HOXC13-201ENST00000243056 ABCA12Q86UK0 2595 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 FMC1Q96HJ9 113 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 RNF7Q9UBF6 113 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 AGRNO00468 2067 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 RIGQ13278 110 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 UBTD1Q9HAC8 227 aa15.62■□□□□ 0.09
HOXC13-201ENST00000243056 B9A039 149 aa15.61■□□□□ 0.09
HOXC13-201ENST00000243056 GATA4P43694 442 aa15.61■□□□□ 0.09
HOXC13-201ENST00000243056 CCL13Q99616 98 aa15.61■□□□□ 0.09
HOXC13-201ENST00000243056 PRNDQ9UKY0 176 aa15.61■□□□□ 0.09
HOXC13-201ENST00000243056 TRAV8-1A0A0A6YYK1 113 aa15.6■□□□□ 0.09
HOXC13-201ENST00000243056 CELSR1Q9NYQ6 3014 aa15.6■□□□□ 0.09
HOXC13-201ENST00000243056 M0QXV9 152 aa15.6■□□□□ 0.09
HOXC13-201ENST00000243056 MZT1Q08AG7 82 aa15.6■□□□□ 0.09
HOXC13-201ENST00000243056 KLF17Q5JT82 389 aaPredicted RBP15.6■□□□□ 0.09
HOXC13-201ENST00000243056 FAM216BQ8N7L0 139 aa15.6■□□□□ 0.09
HOXC13-201ENST00000243056 DLX4Q92988 240 aaPredicted RBP15.6■□□□□ 0.09
HOXC13-201ENST00000243056 C15orf65H3BRN8 121 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 H3BTX0 84 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 FCER1GP30273 86 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 TAL2Q16559 108 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 SRSF12Q8WXF0 261 aaKnown RBP15.59■□□□□ 0.09
HOXC13-201ENST00000243056 IFI27L2Q9H2X8 130 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 RAI1Q7Z5J4 1906 aaPredicted RBP15.59■□□□□ 0.09
HOXC13-201ENST00000243056 PTPN13Q12923 2485 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 ZNF785A8K8V0 405 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 ZNF688P0C7X2 276 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 TEN1Q86WV5 123 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 DOPEY2Q9Y3R5 2298 aa15.59■□□□□ 0.09
HOXC13-201ENST00000243056 TNFRSF1AP19438 455 aa15.58■□□□□ 0.09
HOXC13-201ENST00000243056 CD69Q07108 199 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms