RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MPDU1O75352 247 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
VEGFA-201ENST00000230480 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 FXYD7P58549 80 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 TAS2R60P59551 318 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 FAM78BQ5VT40 261 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-201ENST00000230480 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 IL17DQ8TAD2 202 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 RARRES2Q99969 163 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 SLC25A2Q9BXI2 301 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
VEGFA-201ENST00000230480 TSTD3H0UI37 97 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 PYYP10082 97 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 ID1P41134 155 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 RAB31Q13636 194 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 PSG3Q16557 428 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 PYY3Q5JQD4 70 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 ZNF705AQ6ZN79 300 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-201ENST00000230480 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
VEGFA-201ENST00000230480 BTF3P20290 206 aaKnown RBP9.9□□□□□ -0.82
VEGFA-201ENST00000230480 CNN1P51911 297 aaKnown RBP9.9□□□□□ -0.82
VEGFA-201ENST00000230480 PARD6GQ9BYG4 376 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-201ENST00000230480 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
VEGFA-201ENST00000230480 TMEM14CQ9P0S9 112 aa9.9□□□□□ -0.82
VEGFA-201ENST00000230480 IGHV4-28A0A0C4DH34 117 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 B4DEV8 164 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 PRM2P04554 102 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 KIR3DS1Q14943 382 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 BPIFA4PQ86YQ2 179 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 EIF5A2Q9GZV4 153 aaKnown RBP9.89□□□□□ -0.83
VEGFA-201ENST00000230480 RPRMQ9NS64 109 aa9.89□□□□□ -0.83
VEGFA-201ENST00000230480 TRBV19A0A075B6N1 114 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 AKR1C3P42330 323 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 PSG9Q00887 426 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 OR4B1Q8NGF8 309 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 OR8A1Q8NGG7 326 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 OR10G4Q8NGN3 311 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 ISOC2Q96AB3 205 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 FXYD5Q96DB9 178 aa9.88□□□□□ -0.83
VEGFA-201ENST00000230480 C11orf68Q9H3H3 251 aaKnown RBP9.88□□□□□ -0.83
VEGFA-201ENST00000230480 M0R3E3 92 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 DDTP30046 118 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
VEGFA-201ENST00000230480 TMEM41BQ5BJD5 291 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 LCN15Q6UWW0 184 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 DPPA3Q6W0C5 159 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 HIST3H2BBQ8N257 126 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 RPUSD4Q96CM3 377 aaKnown RBP9.87□□□□□ -0.83
VEGFA-201ENST00000230480 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
VEGFA-201ENST00000230480 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 M0R2Z0 102 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 HIST1H1EP10412 219 aaKnown RBP9.86□□□□□ -0.83
VEGFA-201ENST00000230480 S100A7P31151 101 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 NDUFA6P56556 154 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 ZNF674Q2M3X9 581 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 EBLN2Q6P2I7 272 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 FUT9Q9Y231 359 aa9.86□□□□□ -0.83
VEGFA-201ENST00000230480 ZNF253O75346 499 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 HBE1P02100 147 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 NANOS2P60321 138 aaKnown RBP9.85□□□□□ -0.83
VEGFA-201ENST00000230480 ZNF266Q14584 549 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 EXOC3-AS1Q8N2X6 119 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 TVP23CQ96ET8 276 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 NEU1Q99519 415 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 SLC50A1Q9BRV3 221 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
VEGFA-201ENST00000230480 RBFOX3A6NFN3 312 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 RAB4AP20338 218 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 PNRC1Q12796 327 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-201ENST00000230480 ELOBQ15370 118 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 SPINK13Q1W4C9 94 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 RPP25LQ8N5L8 163 aaKnown RBP9.84□□□□□ -0.83
VEGFA-201ENST00000230480 FAM19A4Q96LR4 140 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 SH3BGRL3Q9H299 93 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 TIMM9Q9Y5J7 89 aa9.84□□□□□ -0.83
VEGFA-201ENST00000230480 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 A0A1B0GV90 55 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 PLAC8L1A1L4L8 177 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BKO60814 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BJP06899 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
VEGFA-201ENST00000230480 OR10J4P0C629 311 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 NBEAP1P0C6P0 100 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 MIFP14174 115 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms