RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
USB1-201ENST00000219281 C11orf71Q6IPW1 123 aa13.42□□□□□ -0.26
USB1-201ENST00000219281 ZNF575Q86XF7 245 aa13.42□□□□□ -0.26
USB1-201ENST00000219281 PIEZO1Q92508 2521 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 TRAV8-6A0A0B4J262 113 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 A0A1W2PPR1 153 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 Q8N6K4 173 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 DPF1Q92782 380 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 ORM1P02763 201 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 TMEM11P17152 192 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 UQCRFS1P47985 274 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 CCDC144NLQ6NUI1 221 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 WFDC3Q8IUB2 231 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 ARL6IP6Q8N6S5 226 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 OR1N2Q8NGR9 330 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 IFI27L1Q96BM0 104 aa13.41□□□□□ -0.26
USB1-201ENST00000219281 C7orf71A4D174 169 aa13.4□□□□□ -0.26
USB1-201ENST00000219281 CDKN1BP46527 198 aa13.4□□□□□ -0.26
USB1-201ENST00000219281 ERCC8Q13216 396 aa13.4□□□□□ -0.26
USB1-201ENST00000219281 RNF151Q2KHN1 245 aa13.4□□□□□ -0.26
USB1-201ENST00000219281 ASH1LQ9NR48 2969 aaKnown RBP13.4□□□□□ -0.26
USB1-201ENST00000219281 FBLL1A6NHQ2 334 aaKnown RBP13.39□□□□□ -0.27
USB1-201ENST00000219281 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
USB1-201ENST00000219281 PEF1Q9UBV8 284 aaKnown RBP13.39□□□□□ -0.27
USB1-201ENST00000219281 IGHV7-81A0A0B4J1V7 117 aa13.39□□□□□ -0.27
USB1-201ENST00000219281 NDUFS7O75251 213 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 GAS8-AS1O95177 125 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 SEC11AP67812 179 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 PRSS57Q6UWY2 283 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 BOD1L2Q8IYS8 172 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 RNF185Q96GF1 192 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 CST9LQ9H4G1 147 aa13.38□□□□□ -0.27
USB1-201ENST00000219281 SMAD7O15105 426 aaKnown RBP13.37□□□□□ -0.27
USB1-201ENST00000219281 EBI3Q14213 229 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 SVEP1Q4LDE5 3571 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 FABP5P3A8MUU1 101 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 ZFP36P26651 326 aaKnown RBP13.37□□□□□ -0.27
USB1-201ENST00000219281 RNF182Q8N6D2 247 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
USB1-201ENST00000219281 PPIFP30405 207 aaKnown RBP13.36□□□□□ -0.27
USB1-201ENST00000219281 Q8N9W7 124 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 PSMG3-AS1Q96PY0 264 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 MAP1LC3AQ9H492 121 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 IGHV3-66A0A0C4DH42 116 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 A1L4Q6 167 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 NMUP48645 174 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 SRSF2Q01130 221 aaKnown RBP13.36□□□□□ -0.27
USB1-201ENST00000219281 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
USB1-201ENST00000219281 PKD1L2Q7Z442 2459 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 OOSP1A8MZH6 123 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 MINOS1Q5TGZ0 78 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 C1orf122Q6ZSJ8 110 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 DTX2Q86UW9 622 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 MINOS1-NBL1R4GNA1 71 aa13.35□□□□□ -0.27
USB1-201ENST00000219281 CLEC3BP05452 202 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 EVI2AP22794 236 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 OCIAD2Q56VL3 154 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 IL17RELQ6ZVW7 336 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 PCP2Q8IVA1 136 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 GAGE12BA1L429 117 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 LEPP41159 167 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 OR9G4Q8NGQ1 327 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 ZNF502Q8TBZ5 544 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 CNFNQ9BYD5 112 aa13.34□□□□□ -0.27
USB1-201ENST00000219281 MED13LQ71F56 2210 aa13.33□□□□□ -0.27
USB1-201ENST00000219281 A6NDN8 102 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 BUB3O43684 328 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 TNFRSF6BO95407 300 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 S100A7P31151 101 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 ZFAND3Q9H8U3 227 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 IGHV3OR16-13A0A075B7E8 117 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 IGHV3-74A0A0B4J1X5 117 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 PPBPP02775 128 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 GATA1P15976 413 aaPredicted RBP13.33□□□□□ -0.28
USB1-201ENST00000219281 HSD52Q0P140 79 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 ADAMTSL5Q6ZMM2 481 aa13.33□□□□□ -0.28
USB1-201ENST00000219281 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
USB1-201ENST00000219281 ITLN2Q8WWU7 325 aaPredicted RBP13.33□□□□□ -0.28
USB1-201ENST00000219281 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 H3BRM9 83 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 SIVA1O15304 175 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 C9orf118A6NHY6 69 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 NAA38Q9BRA0 125 aaKnown RBP13.32□□□□□ -0.28
USB1-201ENST00000219281 NPFFR1Q9GZQ6 430 aa13.32□□□□□ -0.28
USB1-201ENST00000219281 ATP6V0E1O15342 81 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 GNLYP22749 145 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 FCER1GP30273 86 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 KIR3DS1Q14943 382 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 OR4X2Q8NGF9 303 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 SIRPDQ9H106 197 aa13.31□□□□□ -0.28
USB1-201ENST00000219281 LINC01546A6NGU7 62 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms