RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 KIR2DL5AQ8N109 375 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 TNRC6BQ9UPQ9 1833 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 TRBV7-1A0A0A6YYK4 115 aa9.71□□□□□ -0.85
TM9SF4-201ENST00000217315 HAX1O00165 279 aa9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 DLEU1O43261 78 aa9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 ZNF124Q15973 351 aa9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 ZFP36P26651 326 aaKnown RBP9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 KLF12Q9Y4X4 402 aa9.71□□□□□ -0.86
TM9SF4-201ENST00000217315 A0A087X0K7 114 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 IGHV7-81A0A0B4J1V7 117 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 TTC9CQ8N5M4 171 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 IGLV11-55A0A075B6I3 123 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 FAM104BQ5XKR9 115 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 FBXL19-AS1Q494R0 122 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 IL17RELQ6ZVW7 336 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 TMEM190Q8WZ59 177 aa9.7□□□□□ -0.86
TM9SF4-201ENST00000217315 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 C1orf122Q6ZSJ8 110 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 ATP5LO75964 103 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 SNRPD3P62318 126 aaKnown RBP9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 NPBQ8NG41 125 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 DYNLRB2Q8TF09 96 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 DSPP15924 2871 aaKnown RBP9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 TRAV21A0A0B4J279 112 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 CTSGP08311 255 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 DEFB104AQ8WTQ1 72 aa9.69□□□□□ -0.86
TM9SF4-201ENST00000217315 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 OR4X2Q8NGF9 303 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 TP53TG3Q9ULZ0 132 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 PRSS57Q6UWY2 283 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 STPG4Q8N801 248 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
TM9SF4-201ENST00000217315 IGHV1-69DA0A0B4J2H0 117 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 IGHV1-69P01742 117 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 EGR2P11161 476 aaPredicted RBP9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 ZNF56Q15929 161 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 MRPL51Q4U2R6 128 aaKnown RBP9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 C9orf139Q6ZV77 190 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 PSMB11A5LHX3 300 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 OVOL3O00110 214 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 NDUFA3O95167 84 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 CD7P09564 240 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 GDF5OSQ5U4N7 250 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 Q8N9W7 124 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 HERVK_113P61574 105 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 DYNAPQ8N1N2 210 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 MAPK1IP1LQ8NDC0 245 aa9.67□□□□□ -0.86
TM9SF4-201ENST00000217315 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 OR11H1Q8NG94 326 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 B4DSR2 109 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 ESDP10768 282 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 DUX5Q96PT3 197 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 CENPVL3A0A0U1RRI6 287 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 CRYGBP07316 175 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 CDSNQ15517 529 aa9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 NAA38Q9BRA0 125 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-201ENST00000217315 LRRK2Q5S007 2527 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 OVOL1O14753 267 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 TNFRSF6BO95407 300 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 NPYP01303 97 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 SYT8Q8NBV8 401 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 TMEM158Q8WZ71 300 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 C14orf178Q8N769 122 aaPredicted RBP9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 LY6G5BQ8NDX9 201 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
TM9SF4-201ENST00000217315 FCN3O75636 299 aa9.65□□□□□ -0.87
TM9SF4-201ENST00000217315 SCGB1C2P0DMR2 95 aa9.65□□□□□ -0.87
TM9SF4-201ENST00000217315 FABP2P12104 132 aa9.65□□□□□ -0.87
TM9SF4-201ENST00000217315 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.87
TM9SF4-201ENST00000217315 MBD6Q96DN6 1003 aa9.65□□□□□ -0.87
TM9SF4-201ENST00000217315 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 MSMBP08118 114 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.874e-11■■□□□ 13.4
TM9SF4-201ENST00000217315 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 ZNF256Q9Y2P7 627 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms